RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 DLGAP4Q9Y2H0 992 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 LOC730098B7Z3J9 87 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 PRR23D1E9PI22 279 aaPredicted RBP9.7□□□□□ -0.86
VPS11-207ENST00000620429 MANBAO00462 879 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 OIP5O43482 229 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 LRATO95237 230 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 IGF2P01344 180 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 PRR23D2P0DMB1 279 aaPredicted RBP9.7□□□□□ -0.86
VPS11-207ENST00000620429 CSF2RBP32927 897 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 CSNK1EP49674 416 aaKnown RBP9.7□□□□□ -0.86
VPS11-207ENST00000620429 DYRK1AQ13627 763 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 LIN54Q6MZP7 749 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 H3F3CQ6NXT2 135 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 C7orf61Q8IZ16 206 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 CFAP52Q8N1V2 620 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 PRR18Q8N4B5 295 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 C15orf54Q8N8G6 183 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 ZNF511Q8NB15 262 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 CA5BP1Q8WTZ4 195 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 ZNF707Q96C28 371 aaPredicted RBP9.7□□□□□ -0.86
VPS11-207ENST00000620429 TPD52L3Q96J77 140 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 MRPL37Q9BZE1 423 aaKnown RBP9.7□□□□□ -0.86
VPS11-207ENST00000620429 ZDHHC5Q9C0B5 715 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 ABCG8Q9H221 673 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 NANSQ9NR45 359 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 CA10Q9NS85 328 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 NFKBIL1Q9UBC1 381 aaPredicted RBP9.7□□□□□ -0.86
VPS11-207ENST00000620429 A0A1W2PQ45 241 aaPredicted RBP9.7□□□□□ -0.86
VPS11-207ENST00000620429 A0A1W2PQY0 241 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 TRAPPC13A5PLN9 417 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 OR2W5A6NFC9 320 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 EIF4E2O60573 245 aaKnown RBP9.7□□□□□ -0.86
VPS11-207ENST00000620429 NCR1O76036 304 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 SPDEFO95238 335 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 EDN3P14138 238 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 IFNGR1P15260 489 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 RCC1P18754 421 aaPredicted RBP9.7□□□□□ -0.86
VPS11-207ENST00000620429 CCR7P32248 378 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 PMELP40967 661 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 PTGER3P43115 390 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 NPBWR1P48145 328 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 CPSF6Q16630 551 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS11-207ENST00000620429 ATAT1Q5SQI0 421 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 CYB5R2Q6BCY4 276 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 TRIM46Q7Z4K8 759 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 PTOV1Q86YD1 416 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 STK40Q8N2I9 435 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 ARIH2OSQ8N7S6 290 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 TRMT10AQ8TBZ6 339 aaKnown RBP9.7□□□□□ -0.86
VPS11-207ENST00000620429 PNPLA2Q96AD5 504 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 ABHD1Q96SE0 405 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 TOLLIPQ9H0E2 274 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 XKR8Q9H6D3 395 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 WDR26Q9H7D7 661 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 DUSP22Q9NRW4 184 aa9.7□□□□□ -0.86
VPS11-207ENST00000620429 TMEM129A0AVI4 362 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 DRGXA6NNA5 263 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 MARCH11A6NNE9 402 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 NPIPB9F8W1W9 429 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 BLOC1S5-TXNDC5H3BN57 136 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 TLR4O00206 839 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 CACNB4O00305 520 aaPredicted RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 SOX1O00570 391 aaPredicted RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 RAB36O95755 333 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 RPLP2P05387 115 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 NR2F6P10588 404 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 PSMA6P60900 246 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 HNRNPKP61978 463 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS11-207ENST00000620429 GPNMBQ14956 572 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 CTXN3Q4LDR2 81 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 AARDQ4LEZ3 155 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 DNLZQ5SXM8 178 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 PTRHD1Q6GMV3 140 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 NPSR1Q6W5P4 371 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 TMEM173Q86WV6 379 aaPredicted RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 HDDC3Q8N4P3 179 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 MEIOBQ8N635 442 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 DEFB123Q8N688 67 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 AVL9Q8NBF6 648 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 OSTF1Q92882 214 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 SLAMF9Q96A28 289 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 KCTD12Q96CX2 325 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 IL4I1Q96RQ9 567 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 MGME1Q9BQP7 344 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 TSSK6Q9BXA6 273 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 PRDM13Q9H4Q3 707 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 CACYBPQ9HB71 228 aaKnown RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 PDFQ9HBH1 243 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 GFOD1Q9NXC2 390 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 VSX1Q9NZR4 365 aaPredicted RBP9.69□□□□□ -0.86
VPS11-207ENST00000620429 SCML2Q9UQR0 700 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 RAI2Q9Y5P3 530 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 DSPPQ9NZW4 1301 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 PATJQ8NI35 1801 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 ABHD14A-ACY1A0A1B0GW23 586 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 A0A1W2PPE3 182 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 A0A1W2PRB8 838 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 SHISA3A0PJX4 238 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 BTBD17A6NE02 478 aa9.69□□□□□ -0.86
VPS11-207ENST00000620429 MOXD2PA6NHM9 499 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms