RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ABCB7O75027 752 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 PPM1BO75688 479 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 TOXO94900 526 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 KCNK2O95069 426 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 NADKO95544 446 aaPredicted RBP13.57□□□□□ -0.24
UBXN1-218ENST00000616865 BCHEP06276 602 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 NAGAP17050 411 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 MAP3K8P41279 467 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 ART1P52961 327 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 LIPEQ05469 1076 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 EFR3AQ14156 821 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 ARHGAP11BQ3KRB8 267 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 DNAL1Q4LDG9 190 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 EMC4Q5J8M3 183 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 CCNJQ5T5M9 372 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 MDGA2Q7Z553 956 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 GALNT10Q86SR1 603 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 GPALPP1Q8IXQ4 340 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 DMRTC2Q8IXT2 367 aaPredicted RBP13.57□□□□□ -0.24
UBXN1-218ENST00000616865 C11orf65Q8NCR3 313 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 FBXO27Q8NI29 283 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 EFHD2Q96C19 240 aaPredicted RBP13.57□□□□□ -0.24
UBXN1-218ENST00000616865 ADOQ96SZ5 270 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 CDRT15Q96T59 188 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 UCK2Q9BZX2 261 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 KAT8Q9H7Z6 458 aaKnown RBP13.57□□□□□ -0.24
UBXN1-218ENST00000616865 A4GALTQ9NPC4 353 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 KCNJ16Q9NPI9 418 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 KCNE3Q9Y6H6 103 aa13.57□□□□□ -0.24
UBXN1-218ENST00000616865 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.57□□□□□ -0.24
UBXN1-218ENST00000616865 DNAJA2O60884 412 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 GMNNO75496 209 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 TNFRSF21O75509 655 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 STX11O75558 287 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 OR6B1O95007 311 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 IL33O95760 270 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 FBXO45P0C2W1 286 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 HPGDP15428 266 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 MVDP53602 400 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 CRISP3P54108 245 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 PNLIPRP2P54317 469 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 EEFSECP57772 596 aaKnown RBP13.56□□□□□ -0.24
UBXN1-218ENST00000616865 SYPL1Q16563 259 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 SAMD4BQ5PRF9 694 aaKnown RBP13.56□□□□□ -0.24
UBXN1-218ENST00000616865 EXOSC6Q5RKV6 272 aaKnown RBP13.56□□□□□ -0.24
UBXN1-218ENST00000616865 C8orf82Q6P1X6 216 aaPredicted RBP13.56□□□□□ -0.24
UBXN1-218ENST00000616865 ERICH5Q6P6B1 374 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 RTL4Q6ZR62 310 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 NUP54Q7Z3B4 507 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 SERPINA11Q86U17 422 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 TMEM200AQ86VY9 491 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 CCDC71Q8IV32 467 aaPredicted RBP13.56□□□□□ -0.24
UBXN1-218ENST00000616865 SLC30A8Q8IWU4 369 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 SLC15A3Q8IY34 581 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 PSD4Q8NDX1 1056 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 CHDHQ8NE62 594 aaPredicted RBP13.56□□□□□ -0.24
UBXN1-218ENST00000616865 TNIP2Q8NFZ5 429 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 OR2T12Q8NG77 320 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 NFKBIDQ8NI38 313 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 DIO2Q92813 273 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 SPACA9Q96E40 222 aaPredicted RBP13.56□□□□□ -0.24
UBXN1-218ENST00000616865 TRNT1Q96Q11 434 aaKnown RBP13.56□□□□□ -0.24
UBXN1-218ENST00000616865 KCTD14Q9BQ13 255 aaPredicted RBP13.56□□□□□ -0.24
UBXN1-218ENST00000616865 ZNF559Q9BR84 538 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 BTBD10Q9BSF8 475 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 C1orf21Q9H246 121 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 TIMMDC1Q9NPL8 285 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 DEPPQ9NTK1 212 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 CMTM6Q9NX76 183 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 TAS2R1Q9NYW7 299 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 KCNN3Q9UGI6 736 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 ANGPT4Q9Y264 503 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 WDR45Q9Y484 360 aa13.56□□□□□ -0.24
UBXN1-218ENST00000616865 ZNF469Q96JG9 3925 aaPredicted RBP13.56□□□□□ -0.24
UBXN1-218ENST00000616865 OR6C70A6NIJ9 312 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 FAM220BPB1ANY3 271 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 NME4O00746 187 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 PDE9AO76083 593 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 H6PDO95479 791 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 HOXD4P09016 255 aaPredicted RBP13.55□□□□□ -0.24
UBXN1-218ENST00000616865 NUDT7P0C024 238 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 ARAFP10398 606 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 BMP2P12643 396 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 LCN1P31025 176 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 CLK3P49761 638 aaKnown RBP13.55□□□□□ -0.24
UBXN1-218ENST00000616865 NUP107P57740 925 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 FBXW4P57775 412 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 CDK6Q00534 326 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 RBBP4Q09028 425 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 SCARB2Q14108 478 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 GPR68Q15743 365 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.55□□□□□ -0.24
UBXN1-218ENST00000616865 FLYWCH1Q4VC44 716 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 HEPHL1Q6MZM0 1159 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 REEP3Q6NUK4 255 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 KRT73Q86Y46 540 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 METTL25Q8N6Q8 603 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 ANKFN1Q8N957 763 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 ZNF527Q8NB42 609 aa13.55□□□□□ -0.24
UBXN1-218ENST00000616865 MAL2Q969L2 176 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms