RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 ZCCHC10Q8TBK6 192 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 BORCS6Q96GS4 357 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 ASAH2Q9NR71 780 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 IL20Q9NYY1 176 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 ETV7Q9Y603 341 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 ITGB4P16144 1822 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 SMCHD1A6NHR9 2005 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 TMEM200CA6NKL6 621 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 TPOP07202 933 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 CLRN1P58418 232 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 RPE65Q16518 533 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 GPR162Q16538 588 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 ZNF74Q16587 644 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 IQCJQ1A5X6 159 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 SOWAHAQ2M3V2 549 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.02□□□□□ -0.32
CHD1-212ENST00000614616 RTP4Q96DX8 246 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 LMF1Q96S06 567 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 TAF9BQ9HBM6 251 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 AKIP1Q9NQ31 210 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 PHPT1Q9NRX4 125 aaPredicted RBP13.02□□□□□ -0.32
CHD1-212ENST00000614616 CLEC4EQ9ULY5 219 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 SCML1Q9UN30 329 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 GPR45Q9Y5Y3 372 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 PLIN4Q96Q06 1357 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 OR2F2O95006 317 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 ADH1CP00326 375 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 CAMK2DQ13557 499 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 OR2F1Q13607 317 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 ARL6IP1Q15041 203 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 CPZQ66K79 652 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 AVL9Q8NBF6 648 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 C4orf36Q96KX1 117 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 MAFBQ9Y5Q3 323 aaPredicted RBP13.02□□□□□ -0.32
CHD1-212ENST00000614616 H2BFMP0C1H6 154 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 CLDN20P56880 219 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 OR6S1Q8NH40 331 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 LINC01599Q8WXQ3 324 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 KNG1P01042 644 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 HNF1AP20823 631 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 ACTBL2Q562R1 376 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 ADGRG3Q86Y34 549 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 SULF2Q8IWU5 870 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 SMPDL3BQ92485 455 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 MCOLN1Q9GZU1 580 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 SERINC1Q9NRX5 453 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 ANK1P16157 1881 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 RPP30P78346 268 aaKnown RBP13.02□□□□□ -0.33
CHD1-212ENST00000614616 EBPQ15125 230 aaKnown RBP13.02□□□□□ -0.33
CHD1-212ENST00000614616 PDZD11Q5EBL8 140 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 FKBP1CQ5VVH2 108 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 RBMS3Q6XE24 437 aaKnown RBP13.02□□□□□ -0.33
CHD1-212ENST00000614616 FBXL18Q96ME1 805 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 CHD3Q12873 2000 aaKnown RBP13.02□□□□□ -0.33
CHD1-212ENST00000614616 PRICKLE3O43900 615 aaPredicted RBP13.02□□□□□ -0.33
CHD1-212ENST00000614616 ZNF623O75123 536 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 SMIM10L2AP0DMW4 78 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 SMIM10L2BP0DMW5 78 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 VIPR1P32241 457 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 SELENBP1Q13228 472 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 KDELC1Q6UW63 502 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 SIAH3Q8IW03 269 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 KCNRGQ8N5I3 272 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 OR7D4Q8NG98 312 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 KCTD13Q8WZ19 329 aa13.02□□□□□ -0.33
CHD1-212ENST00000614616 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.02□□□□□ -0.33
CHD1-212ENST00000614616 MCM3APO60318 1980 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 LRIT2A6NDA9 550 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 CSNK2A1P68400 391 aaPredicted RBP13.01□□□□□ -0.33
CHD1-212ENST00000614616 HORMAD2Q8N7B1 307 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 CSNK2A3Q8NEV1 391 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 RAB8BQ92930 207 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 POMT1Q9Y6A1 747 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 PMS2P2O95744 297 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 SUMO1P63165 101 aaKnown RBP13.01□□□□□ -0.33
CHD1-212ENST00000614616 SMAD3P84022 425 aaKnown RBP13.01□□□□□ -0.33
CHD1-212ENST00000614616 TEKQ02763 1124 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 ITPK1Q13572 414 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 SMYD5Q6GMV2 418 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 RTL6Q6ICC9 239 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 SLC46A3Q7Z3Q1 461 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 SLC35F2Q8IXU6 374 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 OR52N2Q8NGI0 321 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 ISL2Q96A47 359 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 SLC22A18Q96BI1 424 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 SEC22CQ9BRL7 303 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 ZNF629Q9UEG4 869 aaPredicted RBP13.01□□□□□ -0.33
CHD1-212ENST00000614616 CHRNA9Q9UGM1 479 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 NME1P15531 152 aaKnown RBP13.01□□□□□ -0.33
CHD1-212ENST00000614616 PFKLP17858 780 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 TAS2R46P59540 309 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 MINDY4Q4G0A6 757 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 CMTM1Q8IZ96 169 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 OR4K17Q8NGC6 315 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 OR52P1PQ8NH57 321 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 SLC38A3Q99624 504 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 IGLV3-22A0A075B6J6 115 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 APOA2P02652 100 aa13.01□□□□□ -0.33
CHD1-212ENST00000614616 MAT2AP31153 395 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms