RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SLC44A3Q8N4M1 653 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 KDF1Q8NAX2 398 aaPredicted RBP11.76□□□□□ -0.53
CTCFL-218ENST00000608440 AVL9Q8NBF6 648 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 LCORQ96JN0 433 aaPredicted RBP11.76□□□□□ -0.53
CTCFL-218ENST00000608440 ZNF582Q96NG8 517 aaPredicted RBP11.76□□□□□ -0.53
CTCFL-218ENST00000608440 EGFL8Q99944 293 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 WDR13Q9H1Z4 485 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 TCF7L1Q9HCS4 588 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 A0A1B0GUH1 482 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 MYADML2A6NDP7 307 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 E7EQ34 232 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 MANBAO00462 879 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 GOSR2O14653 212 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 PRAF2O60831 178 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 KRT33AO76009 404 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 LATS1O95835 1130 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 ANXA11P50995 505 aaKnown RBP11.76□□□□□ -0.53
CTCFL-218ENST00000608440 STARD6P59095 220 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 PPIAP62937 165 aaKnown RBP11.76□□□□□ -0.53
CTCFL-218ENST00000608440 HTRA3P83110 453 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 SCAPQ12770 1279 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 KLF9Q13886 244 aaPredicted RBP11.76□□□□□ -0.53
CTCFL-218ENST00000608440 DCAF12L2Q5VW00 463 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 LINC01465Q8N7H1 131 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 MYLIPQ8WY64 445 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 PNPLA2Q96AD5 504 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 ORAI1Q96D31 301 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 FAIM2Q9BWQ8 316 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 ZSCAN32Q9NX65 697 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 GFOD1Q9NXC2 390 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 SIP14410 1827 aa11.76□□□□□ -0.53
CTCFL-218ENST00000608440 EVPLQ92817 2033 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 LRRN3E7EW58 273 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 PRMT3O60678 531 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 CD2P06729 351 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 USP17L7P0C7H9 530 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 LIMS3P0CW19 117 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 LIMS4P0CW20 117 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 TYRP14679 529 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 ABOP16442 354 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 PNLIPRP2P54317 469 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 OR2B8PP59922 312 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 WDR5P61964 334 aaKnown RBP11.75□□□□□ -0.53
CTCFL-218ENST00000608440 TOMM20Q15388 145 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 RNLSQ5VYX0 342 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 SLC30A6Q6NXT4 461 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 UQCC3Q6UW78 93 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 ZNF561Q8N587 486 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 ZNF511Q8NB15 262 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 SLC2A13Q96QE2 648 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 ORAI3Q9BRQ5 295 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 SLC25A51Q9H1U9 297 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 LRRN3Q9H3W5 708 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 THSD1Q9NS62 852 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 PCDHB9Q9Y5E1 797 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 A0A087X0M5 115 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 A0A1B0GX30 115 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 RPP40O75818 363 aaKnown RBP11.75□□□□□ -0.53
CTCFL-218ENST00000608440 YIF1AO95070 293 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 HCKP08631 526 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 ATXN1LP0C7T5 689 aaKnown RBP11.75□□□□□ -0.53
CTCFL-218ENST00000608440 FOLR2P14207 255 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 COX7A2P14406 83 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 AKR1A1P14550 325 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 ELNP15502 786 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 HTR2AP28223 471 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 SDHAP31040 664 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 THBS2P35442 1172 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 HCCSP53701 268 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 GMFBP60983 142 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 SF1Q15637 639 aaKnown RBP11.75□□□□□ -0.53
CTCFL-218ENST00000608440 SLC25A35Q3KQZ1 300 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 RPL13AP3Q6NVV1 102 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 LRRTM1Q86UE6 522 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 CCDC116Q8IYX3 515 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 RNF175Q8N4F7 328 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 C11orf65Q8NCR3 313 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 APIPQ96GX9 242 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 ATG101Q9BSB4 218 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 POLR2J3Q9H1A7 115 aaKnown RBP11.75□□□□□ -0.53
CTCFL-218ENST00000608440 FZD8Q9H461 694 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 SUV39H2Q9H5I1 410 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 HRASLSQ9HDD0 168 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 MEPEQ9NQ76 525 aaPredicted RBP11.75□□□□□ -0.53
CTCFL-218ENST00000608440 ELOVL2Q9NXB9 296 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 LAMP5Q9UJQ1 280 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 TNFSF13BQ9Y275 285 aa11.75□□□□□ -0.53
CTCFL-218ENST00000608440 PPIHO43447 177 aaKnown RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 MED6O75586 246 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 PDYNP01213 254 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 HEXAP06865 529 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 UBBP0CG47 229 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 UBCP0CG48 685 aaKnown RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 CCR9P51686 369 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 DAOAP59103 153 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 RPS27AP62979 156 aaKnown RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 UBA52P62987 128 aaKnown RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 PCBP2Q15366 365 aaKnown RBP eCLIP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 CDNFQ49AH0 187 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 HACD4Q5VWC8 232 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms