RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MS4A4EQ96PG1 132 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 KLHDC3Q9BQ90 382 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 BDH2Q9BUT1 245 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 TUBB1Q9H4B7 451 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 TMEM185BQ9H7F4 350 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 UBQLN4Q9NRR5 601 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 ACSS1Q9NUB1 689 aaPredicted RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 PAQR5Q9NXK6 330 aaPredicted RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 A0A0J9YW62 118 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 C7orf72A4D263 438 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 TRIM64A6NGJ6 449 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 TRIM64BA6NI03 449 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 KIF2AO00139 706 aaPredicted RBP11.77□□□□□ -0.53
RPS28-204ENST00000602140 ADAMDEC1O15204 470 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 ALOX5P09917 674 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 NEFHP12036 1026 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 PPP3CBP16298 524 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 KRT4P19013 534 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 IL11P20809 199 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 ME2P23368 584 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 ZNF41P51814 821 aaPredicted RBP11.77□□□□□ -0.53
RPS28-204ENST00000602140 PDE7AQ13946 482 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 GALNTL6Q49A17 601 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 BEX5Q5H9J7 111 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 CCNJQ5T5M9 372 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 HBMQ6B0K9 141 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 MFSD12Q6NUT3 480 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 ESPNLQ6ZVH7 1005 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 C4orf33Q8N1A6 199 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 COX18Q8N8Q8 333 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 OR2V1Q8NHB1 315 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 UBLCP1Q8WVY7 318 aaPredicted RBP11.77□□□□□ -0.53
RPS28-204ENST00000602140 JADE3Q92613 823 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 GATA5Q9BWX5 397 aaPredicted RBP11.77□□□□□ -0.53
RPS28-204ENST00000602140 DNAJC15Q9Y5T4 150 aa11.77□□□□□ -0.53
RPS28-204ENST00000602140 SCDO00767 359 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 LSM1O15116 133 aaKnown RBP11.76□□□□□ -0.53
RPS28-204ENST00000602140 CHEK2O96017 543 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 PLAUP00749 431 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 LCN1P31025 176 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 SERPINB4P48594 390 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 PTH2RP49190 550 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 PRIM2P49643 509 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 PCLAFQ15004 111 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 CD226Q15762 336 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 PDSS1Q5T2R2 415 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 KANK2Q63ZY3 851 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 ZCCHC12Q6PEW1 402 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 ZNF704Q6ZNC4 412 aaPredicted RBP11.76□□□□□ -0.53
RPS28-204ENST00000602140 RNF165Q6ZSG1 346 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 BEND4Q6ZU67 534 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 STK32CQ86UX6 486 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 TDRPQ86YL5 185 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 WFDC8Q8IUA0 241 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 MISPQ8IVT2 679 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 B4GALNT2Q8NHY0 566 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 POC1BQ8TC44 478 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 EPS8L3Q8TE67 593 aaKnown RBP11.76□□□□□ -0.53
RPS28-204ENST00000602140 NUDT8Q8WV74 236 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 OSTF1Q92882 214 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 FAM120BQ96EK7 910 aaKnown RBP11.76□□□□□ -0.53
RPS28-204ENST00000602140 CHMP6Q96FZ7 201 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 PLPPR2Q96GM1 343 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 GSX2Q9BZM3 304 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 ACTR6Q9GZN1 396 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 C12orf49Q9H741 205 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 FANCFQ9NPI8 374 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 GLRX2Q9NS18 164 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 ZCCHC3Q9NUD5 404 aaKnown RBP11.76□□□□□ -0.53
RPS28-204ENST00000602140 TMED5Q9Y3A6 229 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 ARID1AO14497 2285 aa11.76□□□□□ -0.53
RPS28-204ENST00000602140 RAI1Q7Z5J4 1906 aaPredicted RBP11.76□□□□□ -0.53
RPS28-204ENST00000602140 A0A1W2PQD3 144 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 TMEM233B4DJY2 109 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 TRIM13O60858 407 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 CNOT4O95628 575 aaKnown RBP11.75□□□□□ -0.53
RPS28-204ENST00000602140 TUBBP07437 444 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 BCKDHAP12694 445 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 PCSK6P29122 969 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 SHC1P29353 583 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 AGTR1P30556 359 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 SFTPDP35247 375 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 ASMTP46597 345 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 NR1H2P55055 460 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 CARD18P57730 90 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 POU6F2P78424 691 aaPredicted RBP11.75□□□□□ -0.53
RPS28-204ENST00000602140 LASP1Q14847 261 aaKnown RBP11.75□□□□□ -0.53
RPS28-204ENST00000602140 EXOSC6Q5RKV6 272 aaKnown RBP11.75□□□□□ -0.53
RPS28-204ENST00000602140 GTF2IRD2BQ6EKJ0 949 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 ALKBH2Q6NS38 261 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 R3HCC1LQ7Z5L2 792 aaKnown RBP11.75□□□□□ -0.53
RPS28-204ENST00000602140 GTF2IRD2Q86UP8 949 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 TRABD2AQ86V40 505 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 DDIASQ8IXT1 998 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 LILRA2Q8N149 483 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 PHOSPHO1Q8TCT1 267 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 TMEM171Q8WVE6 324 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 IGFBPL1Q8WX77 278 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 ROBO4Q8WZ75 1007 aa11.75□□□□□ -0.53
RPS28-204ENST00000602140 CDS1Q92903 461 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms