RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 GALNSP34059 522 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 ETV6P41212 452 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 RPS26P62854 115 aaKnown RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 RHAGQ02094 409 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 PRKCDQ05655 676 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 CDC20Q12834 499 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 MAP4K2Q12851 820 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 KRR1Q13601 381 aaKnown RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 ATP1A4Q13733 1029 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 ZNF181Q2M3W8 571 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 DCST1Q5T197 706 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 HES3Q5TGS1 186 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 SLX4IPQ5VYV7 408 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 ZNF385CQ66K41 422 aaPredicted RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 TCTN3Q6NUS6 607 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 TNFAIP8L2Q6P589 184 aaPredicted RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 PLEKHG7Q6ZR37 379 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 COX15Q7KZN9 410 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 GALNT12Q8IXK2 581 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 OR9Q2Q8NGE9 314 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 BBS10Q8TAM1 723 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 STT3BQ8TCJ2 826 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 RIT1Q92963 219 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 CTHRC1Q96CG8 243 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 TMEM19Q96HH6 336 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 MS4A4EQ96PG1 132 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 FUZQ9BT04 418 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 ULBP3Q9BZM4 244 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 UCK2Q9BZX2 261 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 SP140LQ9H930 580 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 SLC25A19Q9HC21 320 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 MAT2BQ9NZL9 334 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 CTSFQ9UBX1 484 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 DAPK2Q9UIK4 370 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.85□□□□□ -0.67
VRK3-223ENST00000601341 C19orf53Q9UNZ5 99 aaPredicted RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 CFL2Q9Y281 166 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 RIF1Q5UIP0 2472 aaKnown RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 CCDC187A0A096LP49 1063 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 PNMA8CA0A1B0GUJ8 204 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 FFAR1O14842 300 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 SNX4O95219 450 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 GASTP01350 101 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 IFNA16P05015 189 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 BCHEP06276 602 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 JMJD7P0C870 316 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 IMPDH2P12268 514 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 ENDOUP21128 410 aaKnown RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 CSRP1P21291 193 aaKnown RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 ELAVL4P26378 380 aaKnown RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 KHKP50053 298 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 MGAT2Q10469 447 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 LASP1Q14847 261 aaKnown RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 NCF4Q15080 339 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 OCLNQ16625 522 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 TRMT12Q53H54 448 aaKnown RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 ARMCX4Q5H9R4 360 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 FHL5Q5TD97 284 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 C12orf73Q69YU5 71 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 FAM111BQ6SJ93 734 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 PTCHD4Q6ZW05 846 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 ASCL5Q7RTU5 278 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 OVCH1Q7RTY7 1134 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 VWA5B2Q8N398 1253 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 B3GNT7Q8NFL0 401 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 GPR32P1Q8NGA4 272 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 OR8J1Q8NGP2 316 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 RNF31Q96EP0 1072 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 ZNF578Q96N58 590 aaPredicted RBP10.85□□□□□ -0.67
VRK3-223ENST00000601341 TAAR9Q96RI9 348 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 ACTRT3Q9BYD9 372 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 ANKRA2Q9H9E1 313 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 CPNE5Q9HCH3 593 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 GPR83Q9NYM4 423 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 REV1Q9UBZ9 1251 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 MKL2Q9ULH7 1088 aa10.85□□□□□ -0.67
VRK3-223ENST00000601341 CCDC88CQ9P219 2028 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 IGKV3D-11A0A0A0MRZ8 115 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 AGAP5A6NIR3 686 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 DUXAA6NLW8 204 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 J3KTA2 159 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 PLD2O14939 933 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 ASNA1O43681 348 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 DYRK3O43781 588 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 DKK1O94907 266 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 STSP08842 583 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 ZGLP1P0C6A0 271 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 FTH1P19P0C7X4 201 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 ZNF28P17035 718 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 TNNI3P19429 210 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 SOX6P35712 828 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 SOX18P35713 384 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 CRISP3P54108 245 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 UGT2B15P54855 530 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 CLDN6P56747 220 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 NSDHLQ15738 373 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 AGAP7PQ5VUJ5 663 aa10.84□□□□□ -0.67
VRK3-223ENST00000601341 Q6ZPB1 254 aaPredicted RBP10.84□□□□□ -0.67
VRK3-223ENST00000601341 PRSS58Q8IYP2 241 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms