RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 ZNF527Q8NB42 609 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 OR4K5Q8NGD3 323 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 IPCEF1Q8WWN9 437 aaPredicted RBP18.52■□□□□ 0.55
PNKP-214ENST00000600573 DIO2Q92813 273 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 ADIPOR1Q96A54 375 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 HSPBAP1Q96EW2 488 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 IRF2BPLQ9H1B7 796 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 SEMA4GQ9NTN9 838 aa18.52■□□□□ 0.55
PNKP-214ENST00000600573 PAK1IP1Q9NWT1 392 aaPredicted RBP18.52■□□□□ 0.55
PNKP-214ENST00000600573 WDFY4Q6ZS81 3184 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 PEX12O00623 359 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 WBP4O75554 376 aaKnown RBP18.51■□□□□ 0.55
PNKP-214ENST00000600573 ENDOUP21128 410 aaKnown RBP18.51■□□□□ 0.55
PNKP-214ENST00000600573 ADH7P40394 386 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 IDH2P48735 452 aaKnown RBP18.51■□□□□ 0.55
PNKP-214ENST00000600573 ENTPD8Q5MY95 495 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 DCAF12Q5T6F0 453 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 CD300LDQ6UXZ3 194 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 ANKRD37Q7Z713 158 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 ALDH16A1Q8IZ83 802 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 OR4N2Q8NGD1 307 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 APH1BQ8WW43 257 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 SGCDQ92629 289 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 TP53INP1Q96A56 240 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 NMD3Q96D46 503 aaKnown RBP18.51■□□□□ 0.55
PNKP-214ENST00000600573 NUDT9Q9BW91 350 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 DUSP21Q9H596 190 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 KCNE5Q9UJ90 142 aa18.51■□□□□ 0.55
PNKP-214ENST00000600573 CPSF4LA6NMK7 179 aaKnown RBP18.5■□□□□ 0.55
PNKP-214ENST00000600573 PTGES3LE9PB15 166 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 ZNF701M0R085 212 aaPredicted RBP18.5■□□□□ 0.55
PNKP-214ENST00000600573 FRS3O43559 492 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 MPZL2O60487 215 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 IGKV1D-16P01601 117 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 GSTM3P21266 225 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 CHMP24386 653 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 SLC35A2P78381 396 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 FGFBP1Q14512 234 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 EBPQ15125 230 aaKnown RBP18.5■□□□□ 0.55
PNKP-214ENST00000600573 TMEM205Q6UW68 189 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 RRM2BQ7LG56 351 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 CLVS1Q8IUQ0 354 aaPredicted RBP18.5■□□□□ 0.55
PNKP-214ENST00000600573 ZNF440Q8IYI8 595 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 CTRCQ99895 268 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 ZNF559Q9BR84 538 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 SEMA4CQ9C0C4 833 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 KRCC1Q9NPI7 259 aaPredicted RBP18.5■□□□□ 0.55
PNKP-214ENST00000600573 UBQLN4Q9NRR5 601 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 REV1Q9UBZ9 1251 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 SLC35A3Q9Y2D2 325 aa18.5■□□□□ 0.55
PNKP-214ENST00000600573 SAGE2PA6NJ88 616 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 C9J4A7 227 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 CCL4P13236 92 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 ITIH1P19827 911 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 SLC5A2P31639 672 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 GPR143P51810 404 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 ZNF136P52737 540 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 EFNA3P52797 238 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 ALDH6A1Q02252 535 aaKnown RBP18.49■□□□□ 0.55
PNKP-214ENST00000600573 TARDBPQ13148 414 aaKnown RBP eCLIP18.49■□□□□ 0.55
PNKP-214ENST00000600573 EIF3IQ13347 325 aaKnown RBP18.49■□□□□ 0.55
PNKP-214ENST00000600573 TUBA3CQ13748 450 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 PTGES3Q15185 160 aaKnown RBP18.49■□□□□ 0.55
PNKP-214ENST00000600573 CDCP2Q5VXM1 449 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 XAF1Q6GPH4 301 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 SVOPQ8N4V2 548 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 ZSCAN1Q8NBB4 408 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 B3GNT7Q8NFL0 401 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 OR13F1Q8NGS4 319 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 OR8K3Q8NH51 312 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 RHOXF1Q8NHV9 184 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 ZNF420Q8TAQ5 688 aaPredicted RBP18.49■□□□□ 0.55
PNKP-214ENST00000600573 LIN37Q96GY3 246 aaPredicted RBP18.49■□□□□ 0.55
PNKP-214ENST00000600573 SPSB2Q99619 263 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 CCDC90BQ9GZT6 254 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 TMEM27Q9HBJ8 222 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 CTPS2Q9NRF8 586 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 PLCXD1Q9NUJ7 323 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 AASSQ9UDR5 926 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 TRAPPC13A5PLN9 417 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 RGS10O43665 173 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 TPST2O60704 377 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 RFX3P48380 749 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 SPEM2Q0P670 501 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 SMN1Q16637 294 aaKnown RBP18.49■□□□□ 0.55
PNKP-214ENST00000600573 PDZK1Q5T2W1 519 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 C1orf94Q6P1W5 598 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 ZNF613Q6PF04 617 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 CPEB2Q7Z5Q1 589 aaKnown RBP18.49■□□□□ 0.55
PNKP-214ENST00000600573 RNF113BQ8IZP6 322 aaKnown RBP18.49■□□□□ 0.55
PNKP-214ENST00000600573 ZNF540Q8NDQ6 660 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 ACOT11Q8WXI4 607 aaPredicted RBP18.49■□□□□ 0.55
PNKP-214ENST00000600573 MUL1Q969V5 352 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 SLC41A3Q96GZ6 507 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 LPAR4Q99677 370 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 CRB3Q9BUF7 120 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 TRIM2Q9C040 744 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 WWTR1Q9GZV5 400 aa18.49■□□□□ 0.55
PNKP-214ENST00000600573 ZNF226Q9NYT6 803 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms