RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 DVL2O14641 736 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 PDPK1O15530 556 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 SCN2BO60939 215 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 BMP7P18075 431 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 TLX1P31314 330 aaPredicted RBP12.47□□□□□ -0.41
IRF3-225ENST00000600022 BUD31P41223 144 aaPredicted RBP12.47□□□□□ -0.41
IRF3-225ENST00000600022 ASCL1P50553 236 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 FOXF2Q12947 444 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 POU4F3Q15319 338 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 FBXL19-AS1Q494R0 122 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 RUNDC3AQ59EK9 446 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 WIPI1Q5MNZ9 446 aaPredicted RBP12.47□□□□□ -0.41
IRF3-225ENST00000600022 VASNQ6EMK4 673 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 ANKRD26P1Q6NSI1 321 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 RNF111Q6ZNA4 994 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 SLC29A4Q7RTT9 530 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 SPATA24Q86W54 205 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 ANKRD46Q86W74 232 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 IFNEQ86WN2 208 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 ST13P4Q8IZP2 240 aaPredicted RBP12.47□□□□□ -0.41
IRF3-225ENST00000600022 SIMC1Q8NDZ2 872 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 HIPK4Q8NE63 616 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 BHLHE22Q8NFJ8 381 aaPredicted RBP12.47□□□□□ -0.41
IRF3-225ENST00000600022 ZFP28Q8NHY6 868 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 FAM222BQ8WU58 562 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 POP5Q969H6 163 aaKnown RBP12.47□□□□□ -0.41
IRF3-225ENST00000600022 WDYHV1Q96HA8 205 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 ALPK1Q96QP1 1244 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 TRIB1Q96RU8 372 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 PAIP1Q9H074 479 aaKnown RBP12.47□□□□□ -0.41
IRF3-225ENST00000600022 UBQLN3Q9H347 655 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 CMTM6Q9NX76 183 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 MS4A12Q9NXJ0 267 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 CD300AQ9UGN4 299 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 MAGEL2Q9UJ55 1249 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 PACSIN3Q9UKS6 424 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 CAMK2AQ9UQM7 478 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 PCDHGB3Q9Y5G1 929 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 ZANQ9Y493 2812 aa12.47□□□□□ -0.41
IRF3-225ENST00000600022 TRBV5-3A0A0A0MS03 114 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 A0A1W2PRB8 838 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 SYNDIG1LA6NDD5 238 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 TUBAL3A6NHL2 446 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 OR10H2O60403 315 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 HPNP05981 417 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 ZCCHC18P0CG32 403 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 EPXP11678 715 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 HOXB9P17482 250 aaPredicted RBP12.46□□□□□ -0.41
IRF3-225ENST00000600022 NTSP30990 170 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 TIMP3P35625 211 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 FRKP42685 505 aaPredicted RBP12.46□□□□□ -0.41
IRF3-225ENST00000600022 GSK3BP49841 420 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 CDK9P50750 372 aaKnown RBP12.46□□□□□ -0.41
IRF3-225ENST00000600022 RCN1Q15293 331 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 RABL3Q5HYI8 236 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 OR52E8Q6IFG1 317 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 SLC48A1Q6P1K1 146 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 PAMR1Q6UXH9 720 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 YRDCQ86U90 279 aaKnown RBP12.46□□□□□ -0.41
IRF3-225ENST00000600022 SAMD14Q8IZD0 417 aaPredicted RBP12.46□□□□□ -0.41
IRF3-225ENST00000600022 C9orf106Q8NAJ2 232 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 ADIPOR1Q96A54 375 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 NTNG2Q96CW9 530 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 MBD6Q96DN6 1003 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 FAM120BQ96EK7 910 aaKnown RBP12.46□□□□□ -0.41
IRF3-225ENST00000600022 ZBED6CLQ96FA7 236 aaPredicted RBP12.46□□□□□ -0.41
IRF3-225ENST00000600022 SPATA9Q9BWV2 254 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 UGT2B28Q9BY64 529 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 PRDM14Q9GZV8 571 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 NEUROD4Q9HD90 331 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 QPCTLQ9NXS2 382 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 VAPAQ9P0L0 249 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 SLAMF8Q9P0V8 285 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 STOML1Q9UBI4 398 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 ZNF629Q9UEG4 869 aaPredicted RBP12.46□□□□□ -0.41
IRF3-225ENST00000600022 DTX4Q9Y2E6 619 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 PCDHB14Q9Y5E9 798 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 SNX13Q9Y5W8 968 aa12.46□□□□□ -0.41
IRF3-225ENST00000600022 C2orf92A0A1B0GVN3 265 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 ANKRD33BA6NCL7 494 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 FAM47E-STBD1D6RA91 191 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 H0Y3Z8 333 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 GNB5O14775 395 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 GSNP06396 782 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 PTPN6P29350 595 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 HOXC12P31275 282 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 CASP3P42574 277 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 MANFP55145 182 aaKnown RBP12.45□□□□□ -0.42
IRF3-225ENST00000600022 MTPNP58546 118 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 LTBQ06643 244 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 CCNIQ14094 377 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 PRSS53Q2L4Q9 553 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 DEFB113Q30KQ7 82 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 MTX3Q5HYI7 312 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 NSUN5P2Q63ZY6 315 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 LACC1Q8IV20 430 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 VWA5B2Q8N398 1253 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 ZNF615Q8N8J6 731 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 FAM156AQ8NDB6 213 aa12.45□□□□□ -0.42
IRF3-225ENST00000600022 OR2T12Q8NG77 320 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms