RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 KRT75O95678 551 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 DPP4P27487 766 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 LSP1P33241 339 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 ZNF117Q03924 483 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 CHRNEQ04844 493 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 CBLN3Q6UW01 205 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 ARSKQ6UWY0 536 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 TSPEARQ8WU66 669 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 SARAFQ96BY9 339 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 WDYHV1Q96HA8 205 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 RSPO3Q9BXY4 272 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 HOXD1Q9GZZ0 328 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 POLE3Q9NRF9 147 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 SDHAF3Q9NRP4 125 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 EXD2Q9NVH0 621 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 TAS2R10Q9NYW0 307 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 ICAM5Q9UMF0 924 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 DTNAQ9Y4J8 743 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 DSPPQ9NZW4 1301 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 CELSR2Q9HCU4 2923 aa17.68■□□□□ 0.42
SHKBP1-221ENST00000599833 E9PLN8 166 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 CLIC1O00299 241 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 SCDO00767 359 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 ZG16O60844 167 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 DNAJA2O60884 412 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 H6PDO95479 791 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 NUDT7P0C024 238 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 TFPTP0C1Z6 253 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 ATP6V1C1P21283 382 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 RPS4Y1P22090 263 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 CLK3P49761 638 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 LHX2P50458 406 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 CLDN15P56746 228 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 KLF10Q13118 480 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 GANABQ14697 944 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 RGNQ15493 299 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 CDSNQ15517 529 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 GPR68Q15743 365 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 NDUFAF6Q330K2 333 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 PDZK1Q5T2W1 519 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 SEM1Q6ZVN7 128 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 MTERF4Q7Z6M4 381 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 MISPQ8IVT2 679 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 FAM71CQ8NEG0 241 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 OR4K17Q8NGC6 315 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 PHF10Q8WUB8 498 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 ITLN2Q8WWU7 325 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 TRNT1Q96Q11 434 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 VKORC1Q9BQB6 163 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 CPPED1Q9BRF8 314 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 QRSL1Q9H0R6 528 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 L3MBTL1Q9Y468 752 aa17.67■□□□□ 0.42
SHKBP1-221ENST00000599833 CACNA1CQ13936 2221 aa17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 ANP32DO95626 131 aa17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 PSMA4P25789 261 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 ADH7P40394 386 aa17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 C16orf62Q7Z3J2 963 aa17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 ULK2Q8IYT8 1036 aa17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 ZNF619Q8N2I2 560 aa17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 OR14L1PQ8NHC6 308 aa17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 POC1BQ8TC44 478 aa17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 ABTB1Q969K4 478 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 TP63Q9H3D4 680 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 LEF1Q9UJU2 399 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 LIPT1Q9Y234 373 aa17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 WDR45Q9Y484 360 aa17.66■□□□□ 0.42
SHKBP1-221ENST00000599833 DOCK7Q96N67 2140 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 C15orf38-AP3S2A0A0A6YYH1 394 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 SERINC4A6NH21 518 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 SHISA8B8ZZ34 492 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 CLDN1O95832 211 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 ACTL6AO96019 429 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 SNRPB2P08579 225 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 LINGO3P0C6S8 592 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 CPN1P15169 458 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 CHMP24386 653 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 CLDN18P56856 261 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 SKP2Q13309 424 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 FGFBP1Q14512 234 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 TOMM20Q15388 145 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 PLPPR5Q32ZL2 321 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 RUNDC3AQ59EK9 446 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 LRRC74BQ6ZQY2 392 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 HMGN2P46Q86SG4 172 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 ADGRE4PQ86SQ3 457 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 IFNEQ86WN2 208 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 OR5M1Q8NGP8 315 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 SLC38A5Q8WUX1 472 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 OIT3Q8WWZ8 545 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 CARD8Q9Y2G2 431 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 RPH3AQ9Y2J0 694 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 DCHS2Q6V1P9 2916 aa17.65■□□□□ 0.42
SHKBP1-221ENST00000599833 OR2M5A3KFT3 312 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 C7orf72A4D263 438 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 CLDN24A6NM45 220 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 FXYD1O00168 92 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 ETV2O00321 342 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 GMFGO60234 142 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 ADAM11O75078 769 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 ZNF708P17019 499 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms