RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CHDHQ8NE62 594 aaPredicted RBP9.48□□□□□ -0.89
CCDC9-203ENST00000596938 VPS37AQ8NEZ2 397 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 OR5M1Q8NGP8 315 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 RAB3IL1Q8TBN0 382 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 ZBTB9Q96C00 473 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 OTUB1Q96FW1 271 aaPredicted RBP9.48□□□□□ -0.89
CCDC9-203ENST00000596938 CHMP6Q96FZ7 201 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 SDF2Q99470 211 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 RBM24Q9BX46 236 aaKnown RBP9.48□□□□□ -0.89
CCDC9-203ENST00000596938 TMBIM4Q9HC24 238 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 MED17Q9NVC6 651 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 ZNF175Q9Y473 711 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 KCNE3Q9Y6H6 103 aa9.48□□□□□ -0.89
CCDC9-203ENST00000596938 POLQO75417 2590 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 A0A1W2PNV4 684 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 EEF1E1-BLOC1S5C9J1V9 151 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 SLCO1B7G3V0H7 640 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 H0YC42 278 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 H3BML4 177 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 H3BNH8 94 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 MSTNO14793 375 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 ADAMDEC1O15204 470 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 HDAC3O15379 428 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 EEF1E1O43324 174 aaKnown RBP9.47□□□□□ -0.89
CCDC9-203ENST00000596938 SNNO75324 88 aaPredicted RBP9.47□□□□□ -0.89
CCDC9-203ENST00000596938 AGR2O95994 175 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 AK1P00568 194 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 GUSBP08236 651 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 EPXP11678 715 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 MATN1P21941 496 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 EIF1P41567 113 aaKnown RBP9.47□□□□□ -0.89
CCDC9-203ENST00000596938 ZNF41P51814 821 aaPredicted RBP9.47□□□□□ -0.89
CCDC9-203ENST00000596938 CLNS1AP54105 237 aaKnown RBP9.47□□□□□ -0.89
CCDC9-203ENST00000596938 TPD52P55327 224 aaPredicted RBP9.47□□□□□ -0.89
CCDC9-203ENST00000596938 RPS3AP61247 264 aaKnown RBP9.47□□□□□ -0.89
CCDC9-203ENST00000596938 MAGOHP61326 146 aaKnown RBP9.47□□□□□ -0.89
CCDC9-203ENST00000596938 RAC1P63000 192 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 PHC1P78364 1004 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 SNTB1Q13884 538 aaKnown RBP9.47□□□□□ -0.89
CCDC9-203ENST00000596938 CASP8Q14790 479 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 CD226Q15762 336 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 DPY19L1Q2PZI1 675 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 PLPPR5Q32ZL2 321 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 ATG16L1Q676U5 607 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 CDH24Q86UP0 819 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 GGNQ86UU5 652 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 WDR75Q8IWA0 830 aaKnown RBP9.47□□□□□ -0.89
CCDC9-203ENST00000596938 ZZZ3Q8IYH5 903 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 CLECL1Q8IZS7 167 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 GCNT2Q8N0V5 402 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 GATSQ8NAP1 163 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 OR5AK3PQ8NH89 298 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 B4GALNT2Q8NHY0 566 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 MIPOL1Q8TD10 442 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 FIG4Q92562 907 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 TLCD1Q96CP7 247 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 STARD4Q96DR4 205 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 OR7D2Q96RA2 312 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 RNF122Q9H9V4 155 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 RASSF1Q9NS23 344 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 PAQR5Q9NXK6 330 aaPredicted RBP9.47□□□□□ -0.89
CCDC9-203ENST00000596938 PACSIN3Q9UKS6 424 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 VDAC3Q9Y277 283 aa9.47□□□□□ -0.89
CCDC9-203ENST00000596938 EXPH5Q8NEV8 1989 aa9.46□□□□□ -0.89
CCDC9-203ENST00000596938 TRPC5OSA6NMA1 111 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 A6NNC1 897 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 SDHDO14521 159 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 KLF11O14901 512 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 SEC14L5O43304 696 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 GMFGO60234 142 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 GOSR1O95249 250 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 LINGO3P0C6S8 592 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 UQCRC2P22695 453 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 ADH6P28332 368 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 KIR2DL2P43627 348 aaPredicted RBP9.46□□□□□ -0.9
CCDC9-203ENST00000596938 P2RX1P51575 399 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 SUMO3P55854 103 aaPredicted RBP9.46□□□□□ -0.9
CCDC9-203ENST00000596938 FGFBP1Q14512 234 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 TESK1Q15569 626 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 SGCBQ16585 318 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 ARHGAP11BQ3KRB8 267 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.46□□□□□ -0.9
CCDC9-203ENST00000596938 LUZP2Q86TE4 346 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 TMEM200AQ86VY9 491 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 OR5D16Q8NGK9 328 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 OR4A15Q8NGL6 344 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 FNDC9Q8TBE3 224 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 POC1BQ8TC44 478 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 PHOSPHO1Q8TCT1 267 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 OIT3Q8WWZ8 545 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 SH3YL1Q96HL8 342 aaPredicted RBP9.46□□□□□ -0.9
CCDC9-203ENST00000596938 ADGRG7Q96K78 797 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 DACH2Q96NX9 599 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 PINK1Q9BXM7 581 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 NMUR2Q9GZQ4 415 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 SERHL2Q9H4I8 314 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 MANSC1Q9H8J5 431 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 DNAJB12Q9NXW2 375 aaKnown RBP9.46□□□□□ -0.9
CCDC9-203ENST00000596938 GALNT8Q9NY28 637 aa9.46□□□□□ -0.9
CCDC9-203ENST00000596938 NKIRAS1Q9NYS0 192 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms