RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 CNOT9Q92600 299 aaKnown RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 CENPNQ96H22 339 aaPredicted RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 NODALQ96S42 347 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 ZNF347Q96SE7 839 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 BDH2Q9BUT1 245 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 CEP295Q9C0D2 2601 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 SEMA6AQ9H2E6 1030 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 CCDC86Q9H6F5 360 aaKnown RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 DNAJB12Q9NXW2 375 aaKnown RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 STOML1Q9UBI4 398 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 DNAJB9Q9UBS3 223 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 MED13Q9UHV7 2174 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 FAM32AQ9Y421 112 aaKnown RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 FREM2Q5SZK8 3169 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 GNGT2O14610 69 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 TP53I11O14683 189 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 SCO2O43819 266 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 FADS1O60427 444 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 DNAJB5O75953 348 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 UBTFL6P0CB48 400 aaPredicted RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 UBL4AP11441 157 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 RHCEP18577 417 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 YAP1P46937 504 aaKnown RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 CLK3P49761 638 aaKnown RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 IL20RBQ6UXL0 311 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 RANBP3LQ86VV4 465 aaPredicted RBP13.44□□□□□ -0.26
VRK3-212ENST00000596814 CYP4Z1Q86W10 505 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 GALNT16Q8N428 558 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 GRHL3Q8TE85 626 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 SLC35B4Q969S0 331 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 HPF1Q9NWY4 346 aa13.44□□□□□ -0.26
VRK3-212ENST00000596814 J3KTA2 159 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 AP3D1O14617 1153 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 ADAMDEC1O15204 470 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 NDUFB5O43674 189 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 GKN3PP0CG01 181 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 ENDOUP21128 410 aaKnown RBP13.43□□□□□ -0.26
VRK3-212ENST00000596814 ST13P50502 369 aaKnown RBP13.43□□□□□ -0.26
VRK3-212ENST00000596814 RPP38P78345 283 aaKnown RBP13.43□□□□□ -0.26
VRK3-212ENST00000596814 SPIBQ01892 262 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 TRIP10Q15642 601 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 NDUFAF6Q330K2 333 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 ABHD17BQ5VST6 288 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 MARCH3Q86UD3 253 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 BEST3Q8N1M1 668 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 ICA1LQ8NDH6 482 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 FAM71CQ8NEG0 241 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 RNF138Q8WVD3 245 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 PIP5K1AQ99755 562 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 ING2Q9H160 280 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 KLRF1Q9NZS2 232 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 ABI3Q9P2A4 366 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 TESQ9UGI8 421 aaKnown RBP13.43□□□□□ -0.26
VRK3-212ENST00000596814 APC2O95996 2303 aa13.43□□□□□ -0.26
VRK3-212ENST00000596814 ASPMQ8IZT6 3477 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 GTPBP1O00178 669 aaKnown RBP13.42□□□□□ -0.26
VRK3-212ENST00000596814 EFSO43281 561 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 ZNF264O43296 627 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 CYP7B1O75881 506 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 ANGPTL1O95841 491 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 RRM2P31350 389 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 ZNF136P52737 540 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 HOXC5Q00444 222 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 GANABQ14697 944 aaKnown RBP13.42□□□□□ -0.26
VRK3-212ENST00000596814 ZNF550Q7Z398 422 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 ZNF605Q86T29 641 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 MISPQ8IVT2 679 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 GPALPP1Q8IXQ4 340 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 ZNF440Q8IYI8 595 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 PHF10Q8WUB8 498 aaKnown RBP13.42□□□□□ -0.26
VRK3-212ENST00000596814 PRRC1Q96M27 445 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 MCHR1Q99705 422 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 RTN4RQ9BZR6 473 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 METTL7AQ9H8H3 244 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 REEP1Q9H902 201 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 TESMINQ9Y4I5 508 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 CASQ2O14958 399 aaPredicted RBP13.42□□□□□ -0.26
VRK3-212ENST00000596814 TPST2O60704 377 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 DPM1O60762 260 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 SEMA7AO75326 666 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 E2F6O75461 281 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 PRSS23O95084 383 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 PRG2P13727 222 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 PEX2P28328 305 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 SOX8P57073 446 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 TAS2R41P59536 307 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 SKP2Q13309 424 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 ZNF468Q5VIY5 522 aaPredicted RBP13.42□□□□□ -0.26
VRK3-212ENST00000596814 PLEKHM3Q6ZWE6 761 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 CYP4Z2PQ8N1L4 340 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 TMCO5AQ8N6Q1 288 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 GATA6Q92908 595 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 SECISBP2Q96T21 854 aaKnown RBP13.42□□□□□ -0.26
VRK3-212ENST00000596814 NTN4Q9HB63 628 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 EXOSC3Q9NQT5 275 aaKnown RBP13.42□□□□□ -0.26
VRK3-212ENST00000596814 VNN3Q9NY84 501 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 GPR83Q9NYM4 423 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 ACAD8Q9UKU7 415 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 A4GNTQ9UNA3 340 aa13.42□□□□□ -0.26
VRK3-212ENST00000596814 CARD8Q9Y2G2 431 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms