RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 FNDC9Q8TBE3 224 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 POC1BQ8TC44 478 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 STARD4Q96DR4 205 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 CHMP6Q96FZ7 201 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 PGM2Q96G03 612 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 ADGRG7Q96K78 797 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 RNF145Q96MT1 663 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 OR7D2Q96RA2 312 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 ACTRT3Q9BYD9 372 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 CENPHQ9H3R5 247 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 PIGMQ9H3S5 423 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 UBQLN4Q9NRR5 601 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 MED17Q9NVC6 651 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 EIF3LQ9Y262 564 aaKnown RBP11.74□□□□□ -0.53
LIG1-212ENST00000596549 AP4B1Q9Y6B7 739 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 CCDC168Q8NDH2 2452 aa11.74□□□□□ -0.53
LIG1-212ENST00000596549 A0A1W2PPR1 153 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 C7orf72A4D263 438 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 NPIPB9F8W1W9 429 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 LINC01387J3KSC0 135 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 SCDO00767 359 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 SCN2BO60939 215 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 TNFRSF21O75509 655 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 MPDZO75970 2070 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 AQP8O94778 261 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 F8P00451 2351 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 MYZAPP0CAP1 466 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 IL11P20809 199 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 CPOXP36551 454 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 KIR2DL2P43627 348 aaPredicted RBP11.73□□□□□ -0.53
LIG1-212ENST00000596549 SLC6A8P48029 635 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 CPA2P48052 419 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 PRRC2AP48634 2157 aaKnown RBP11.73□□□□□ -0.53
LIG1-212ENST00000596549 IST1P53990 364 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 SIRPAP78324 504 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 PHC1P78364 1004 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 BST1Q10588 318 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 FOXF1Q12946 379 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 DAZAP2Q15038 168 aaPredicted RBP11.73□□□□□ -0.53
LIG1-212ENST00000596549 NDUFAF6Q330K2 333 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 CBLN3Q6UW01 205 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 SPNS3Q6ZMD2 512 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 CDC20BQ86Y33 519 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 KIF18BQ86Y91 864 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 GTPBP8Q8N3Z3 284 aaPredicted RBP11.73□□□□□ -0.53
LIG1-212ENST00000596549 NATD1Q8N6N6 113 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 MOAP1Q96BY2 351 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 NUF2Q9BZD4 464 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 ZNF175Q9Y473 711 aa11.73□□□□□ -0.53
LIG1-212ENST00000596549 A0A087WZY1 265 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 CENPVL1A0A0U1RR11 272 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 RNF103-CHMP3A0A140T963 221 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 RNASET2O00584 256 aaKnown RBP11.72□□□□□ -0.53
LIG1-212ENST00000596549 EIF1AYO14602 144 aaKnown RBP11.72□□□□□ -0.53
LIG1-212ENST00000596549 MSTNO14793 375 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 CFLARO15519 480 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 SMNDC1O75940 238 aaKnown RBP eCLIP11.72□□□□□ -0.53
LIG1-212ENST00000596549 CGAP01215 116 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 C1QCP02747 245 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 CRHP06850 196 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 ALDOCP09972 364 aaKnown RBP11.72□□□□□ -0.53
LIG1-212ENST00000596549 LINGO3P0C6S8 592 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 EPXP11678 715 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 SHC1P29353 583 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 RPL14P50914 215 aaKnown RBP11.72□□□□□ -0.53
LIG1-212ENST00000596549 ART1P52961 327 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 WDR4P57081 412 aaKnown RBP11.72□□□□□ -0.53
LIG1-212ENST00000596549 LSM12Q3MHD2 195 aaKnown RBP11.72□□□□□ -0.53
LIG1-212ENST00000596549 SPDYE7PQ495Y7 208 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 OR2A2Q6IF42 318 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 ZNF474Q6S9Z5 364 aaPredicted RBP11.72□□□□□ -0.53
LIG1-212ENST00000596549 CHMP1BQ7LBR1 199 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 OLIG3Q7RTU3 272 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 BTLAQ7Z6A9 289 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 MISPQ8IVT2 679 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 CNEP1R1Q8N9A8 125 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 ANKRD42Q8N9B4 389 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 OR8J2Q8NGG1 315 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 B4GALNT2Q8NHY0 566 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 ACTRT2Q8TDY3 377 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 ADAMTS15Q8TE58 950 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 ZBTB8AQ96BR9 441 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 ZNF524Q96C55 264 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 SLC35G5Q96KT7 338 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 PRPF18Q99633 342 aaKnown RBP11.72□□□□□ -0.53
LIG1-212ENST00000596549 OPN3Q9H1Y3 402 aaPredicted RBP11.72□□□□□ -0.53
LIG1-212ENST00000596549 TMEM185BQ9H7F4 350 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 MEAF6Q9HAF1 191 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 PNPOQ9NVS9 261 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 ST6GALNAC2Q9UJ37 374 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.72□□□□□ -0.53
LIG1-212ENST00000596549 TESMINQ9Y4I5 508 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 MED13LQ71F56 2210 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 HIVEP1P15822 2718 aa11.72□□□□□ -0.53
LIG1-212ENST00000596549 TMEM120BA0PK00 339 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 SH3D21A4FU49 640 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 SDHDO14521 159 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 SNUPNO95149 360 aaKnown RBP11.71□□□□□ -0.53
LIG1-212ENST00000596549 OPN1LWP04000 364 aa11.71□□□□□ -0.53
LIG1-212ENST00000596549 HRGP04196 525 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms