RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 MYOTQ9UBF9 498 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 RIMS3Q9UJD0 308 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 SCDO00767 359 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 ABCB7O75027 752 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 CELA2AP08217 269 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 CYP4B1P13584 511 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 NID1P14543 1247 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 LIFP15018 202 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 RPS4Y1P22090 263 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 ABCD3P28288 659 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 GCKP35557 465 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 MAGEA2P43356 314 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 YAP1P46937 504 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 PTDSS1P48651 473 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 CLK3P49761 638 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 EEF1A1P68104 462 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 TLE1Q04724 770 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 IL10RAQ13651 578 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 PDZK1Q5T2W1 519 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 LPCAT4Q643R3 524 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 OR2T5Q6IEZ7 315 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF836Q6ZNA1 936 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 C16orf47Q6ZP98 133 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 NUP54Q7Z3B4 507 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 MRGPREQ86SM8 312 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 KBTBD2Q8IY47 623 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 OR2T29Q8NH02 315 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 OR4C3Q8NH37 302 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 OIT3Q8WWZ8 545 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 FER1L6-AS2Q96M78 137 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 PSMG3-AS1Q96PY0 264 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF300Q96RE9 604 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 ARHGDIGQ99819 225 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 RSPO3Q9BXY4 272 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 VCX3BQ9H321 246 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 CDCP1Q9H5V8 836 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 NDUFAF4Q9P032 175 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 KCNE5Q9UJ90 142 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 DTNAQ9Y4J8 743 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 ENPP4Q9Y6X5 453 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 C2CD3Q4AC94 2353 aa12.01□□□□□ -0.49
SHKBP1-209ENST00000595803 CLEC18AA5D8T8 446 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 SERINC4A6NH21 518 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 OR6C70A6NIJ9 312 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 TMEM200CA6NKL6 621 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 NPIPB9F8W1W9 429 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 H3BNH8 94 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 M0R3H8 397 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 GTPBP1O00178 669 aaKnown RBP12□□□□□ -0.49
SHKBP1-209ENST00000595803 AP3D1O14617 1153 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 CASQ2O14958 399 aaPredicted RBP12□□□□□ -0.49
SHKBP1-209ENST00000595803 E2F6O75461 281 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 PPM1BO75688 479 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 DIRAS1O95057 198 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 SERPINA7P05543 415 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 RHCEP18577 417 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 TBXA2RP21731 343 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 IFNA8P32881 189 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 VHLP40337 213 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 ARHGDIAP52565 204 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 ATP1A4Q13733 1029 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 LRRC36Q1X8D7 754 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 GRAMD1BQ3KR37 738 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 HIST2H2BCQ6DN03 193 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 CLEC18BQ6UXF7 455 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 DEF8Q6ZN54 512 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 RPS19BP1Q86WX3 136 aaKnown RBP12□□□□□ -0.49
SHKBP1-209ENST00000595803 CMIPQ8IY22 773 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 CLEC18CQ8NCF0 446 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 CATSPER1Q8NEC5 780 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 ADAMTS17Q8TE56 1095 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 EME1Q96AY2 570 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 TMCO6Q96DC7 493 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 KLHL4Q9C0H6 718 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 REEP1Q9H902 201 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 ATP13A2Q9NQ11 1180 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 RYDENQ9NUL5 291 aaKnown RBP12□□□□□ -0.49
SHKBP1-209ENST00000595803 RLIMQ9NVW2 624 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 ABCG2Q9UNQ0 655 aa12□□□□□ -0.49
SHKBP1-209ENST00000595803 YARS2Q9Y2Z4 477 aaKnown RBP12□□□□□ -0.49
SHKBP1-209ENST00000595803 CENPVL1A0A0U1RR11 272 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 PRAMEF25A6NGN4 478 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 SAC3D1A6NKF1 404 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 CLDN24A6NM45 220 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 MASP2O00187 686 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 DPM1O60762 260 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 UGT2B11O75310 529 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 CYP7B1O75881 506 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 OR2J2O76002 312 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 NADKO95544 446 aaPredicted RBP11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 OXSR1O95747 527 aaPredicted RBP11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 EPPINO95925 133 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 ITGAMP11215 1152 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 ENDOUP21128 410 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 TMED10P49755 219 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 RNF144AP50876 292 aaPredicted RBP11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 RIPPLY3P57055 190 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 RGS8P57771 180 aaPredicted RBP11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 SMIM11AP58511 58 aa11.99□□□□□ -0.49
SHKBP1-209ENST00000595803 SPIBQ01892 262 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms