RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 MAELQ96JY0 434 aaKnown RBP13.65□□□□□ -0.22
TRIM28-205ENST00000595028 ATP6V1G3Q96LB4 118 aa13.65□□□□□ -0.22
TRIM28-205ENST00000595028 OR7D2Q96RA2 312 aa13.65□□□□□ -0.22
TRIM28-205ENST00000595028 PIGQQ9BRB3 760 aa13.65□□□□□ -0.22
TRIM28-205ENST00000595028 ZNF629Q9UEG4 869 aaPredicted RBP13.65□□□□□ -0.22
TRIM28-205ENST00000595028 PCDHGB4Q9UN71 923 aa13.65□□□□□ -0.22
TRIM28-205ENST00000595028 KCNE3Q9Y6H6 103 aa13.65□□□□□ -0.22
TRIM28-205ENST00000595028 NPIPA5A0A0B4J1W7 369 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 NPIPA7E9PJI5 369 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 GMFGO60234 142 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 NPIPA8P0DM63 369 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 ZNF17P17021 662 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 DGKQP52824 942 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 NME5P56597 212 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 KRTAP10-9P60411 292 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 UFM1P61960 85 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 TMEM44Q2T9K0 475 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 TTMPQ5BVD1 217 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 ARSKQ6UWY0 536 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 C6orf120Q7Z4R8 191 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 UBQLNLQ8IYU4 475 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 CLEC4FQ8N1N0 589 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 MEIOBQ8N635 442 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 VPS37AQ8NEZ2 397 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 OR5M1Q8NGP8 315 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 GOT1L1Q8NHS2 421 aaPredicted RBP13.64□□□□□ -0.23
TRIM28-205ENST00000595028 PIWIL2Q8TC59 973 aaKnown RBP13.64□□□□□ -0.23
TRIM28-205ENST00000595028 WNT2BQ93097 391 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 TEX37Q96LM6 180 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 ZFP3Q96NJ6 502 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 TM9SF2Q99805 663 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 HOXD1Q9GZZ0 328 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 VDAC3Q9Y277 283 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 GPR45Q9Y5Y3 372 aa13.64□□□□□ -0.23
TRIM28-205ENST00000595028 A0A087WZY1 265 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 C9JVG2 144 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 NPIPB9F8W1W9 429 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 H3BML4 177 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 SEC14L5O43304 696 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 CPSF4O95639 269 aaKnown RBP13.63□□□□□ -0.23
TRIM28-205ENST00000595028 IL18BPO95998 194 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 AK1P00568 194 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 TMIGD3P0DMS9 266 aaPredicted RBP13.63□□□□□ -0.23
TRIM28-205ENST00000595028 H2AFXP16104 143 aaPredicted RBP13.63□□□□□ -0.23
TRIM28-205ENST00000595028 MATN1P21941 496 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 UQCRC2P22695 453 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 CTSSP25774 331 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 S100A3P33764 101 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 OPRM1P35372 400 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 DLX5P56178 289 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 FBXL19-AS1Q494R0 122 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 FLYWCH1Q4VC44 716 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 SLC9B1Q4ZJI4 515 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRIM28-205ENST00000595028 SAXO2Q658L1 398 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 NXNQ6DKJ4 435 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 PLXDC2Q6UX71 529 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 GRAMD2AQ8IUY3 354 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 ZNF527Q8NB42 609 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 MIPOL1Q8TD10 442 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 ACTRT2Q8TDY3 377 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 ZNF75CPQ92670 426 aaPredicted RBP13.63□□□□□ -0.23
TRIM28-205ENST00000595028 ZBTB8AQ96BR9 441 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 SH3YL1Q96HL8 342 aaPredicted RBP13.63□□□□□ -0.23
TRIM28-205ENST00000595028 CCDC115Q96NT0 180 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 SH3GL2Q99962 352 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 SFXN3Q9BWM7 321 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 ARGLU1Q9NWB6 273 aaPredicted RBP13.63□□□□□ -0.23
TRIM28-205ENST00000595028 BTNL2Q9UIR0 455 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 ZNF337Q9Y3M9 751 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 L3MBTL1Q9Y468 752 aa13.63□□□□□ -0.23
TRIM28-205ENST00000595028 C7orf72A4D263 438 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 DUXAA6NLW8 204 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 SHISA8B8ZZ34 492 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 H0YC42 278 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 ZNF195O14628 629 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 PGRP06401 933 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 IDO1P14902 403 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 IL12AP29459 219 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 ZNF41P51814 821 aaPredicted RBP13.62□□□□□ -0.23
TRIM28-205ENST00000595028 SUCLG1P53597 346 aaKnown RBP13.62□□□□□ -0.23
TRIM28-205ENST00000595028 ATP12AP54707 1039 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 TPD52P55327 224 aaPredicted RBP13.62□□□□□ -0.23
TRIM28-205ENST00000595028 CLDN15P56746 228 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 EEFSECP57772 596 aaKnown RBP13.62□□□□□ -0.23
TRIM28-205ENST00000595028 ZNF117Q03924 483 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 TLE4Q04727 773 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 FOXF2Q12947 444 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 PLPPR5Q32ZL2 321 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 PDCD4Q53EL6 469 aaKnown RBP13.62□□□□□ -0.23
TRIM28-205ENST00000595028 HDXQ7Z353 690 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 MTERF4Q7Z6M4 381 aaKnown RBP13.62□□□□□ -0.23
TRIM28-205ENST00000595028 CDH24Q86UP0 819 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 GTPBP8Q8N3Z3 284 aaPredicted RBP13.62□□□□□ -0.23
TRIM28-205ENST00000595028 GLB1L3Q8NCI6 653 aaPredicted RBP13.62□□□□□ -0.23
TRIM28-205ENST00000595028 CHDHQ8NE62 594 aaPredicted RBP13.62□□□□□ -0.23
TRIM28-205ENST00000595028 B4GALNT2Q8NHY0 566 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 NEURL3Q96EH8 262 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 MARK4Q96L34 752 aa13.62□□□□□ -0.23
TRIM28-205ENST00000595028 C7orf26Q96N11 449 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms