RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ZAR1Q86SH2 424 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 COMTD1Q86VU5 262 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 CYP4Z1Q86W10 505 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 HIPK1Q86Z02 1210 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 ZDHHC13Q8IUH4 622 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 EPHX4Q8IUS5 362 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 KBTBD2Q8IY47 623 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 SLC34A3Q8N130 599 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 CLIP4Q8N3C7 705 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 CBR4Q8N4T8 237 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 OR4D11Q8NGI4 311 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 DNAJC9Q8WXX5 260 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 NR4A3Q92570 626 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 DIO2Q92813 273 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 IMMP1LQ96LU5 166 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 EPYCQ99645 322 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 ZNF184Q99676 751 aaPredicted RBP12.4□□□□□ -0.42
VMP1-217ENST00000593168 PIP5K1AQ99755 562 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 SLC29A1Q99808 456 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 OSBPL10Q9BXB5 764 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.4□□□□□ -0.42
VMP1-217ENST00000593168 KCND3Q9UK17 655 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 ACAD8Q9UKU7 415 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 SAMHD1Q9Y3Z3 626 aaKnown RBP12.4□□□□□ -0.42
VMP1-217ENST00000593168 AHCTF1Q8WYP5 2266 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 RELNP78509 3460 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 NPIPA5A0A0B4J1W7 369 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 TRBV11-1A0A0K0K1C0 115 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 CDHR4A6H8M9 788 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 NPIPA7E9PJI5 369 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 PDLIM1O00151 329 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 PEX12O00623 359 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 SOCS6O14544 535 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 TSPAN2O60636 221 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 RASAL1O95294 804 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 NPIPA8P0DM63 369 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 RRM2P31350 389 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 DLSTP36957 453 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 IST1P53990 364 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 PNLIPRP2P54317 469 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 PLAG1Q6DJT9 500 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 NDUFAF7Q7L592 441 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 GRAMD2AQ8IUY3 354 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 LACC1Q8IV20 430 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 CMIPQ8IY22 773 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 OR11G2Q8NGC1 345 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 OR6T1Q8NGN1 323 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 VANGL1Q8TAA9 524 aaPredicted RBP12.39□□□□□ -0.43
VMP1-217ENST00000593168 M1APQ8TC57 530 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 ELP5Q8TE02 316 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 SLC35B4Q969S0 331 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 SDCCAG3Q96C92 435 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 WFDC6Q9BQY6 131 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 MMP25Q9NPA2 562 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 UBQLN4Q9NRR5 601 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 RYDENQ9NUL5 291 aaKnown RBP12.39□□□□□ -0.43
VMP1-217ENST00000593168 VNN3Q9NY84 501 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 PCDHGA6Q9Y5G7 932 aa12.39□□□□□ -0.43
VMP1-217ENST00000593168 CENPVL1A0A0U1RR11 272 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 J3KTA2 159 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 M0R3H8 397 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 SOCS2O14508 198 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 PRKNO60260 465 aaPredicted RBP12.38□□□□□ -0.43
VMP1-217ENST00000593168 SEMA7AO75326 666 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 REM1O75628 298 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 NGFRP08138 427 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 NAGAP17050 411 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 TBXA2RP21731 343 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 KRT20P35900 424 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 ADH7P40394 386 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 YAP1P46937 504 aaKnown RBP12.38□□□□□ -0.43
VMP1-217ENST00000593168 NRG3P56975 720 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 SMIM11AP58511 58 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 TLE1Q04724 770 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 FGFBP1Q14512 234 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 PDZK1Q5T2W1 519 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 MRPL2Q5T653 305 aaKnown RBP12.38□□□□□ -0.43
VMP1-217ENST00000593168 TBPL2Q6SJ96 375 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 PPP1R32Q7Z5V6 425 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 TMEM179BQ7Z7N9 219 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 STK32CQ86UX6 486 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 DTX1Q86Y01 620 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 RBM45Q8IUH3 476 aaKnown RBP12.38□□□□□ -0.43
VMP1-217ENST00000593168 TAGAPQ8N103 731 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 GALNT4Q8N4A0 578 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 PIK3C3Q8NEB9 887 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 OR4C3Q8NH37 302 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 PHF10Q8WUB8 498 aaKnown RBP12.38□□□□□ -0.43
VMP1-217ENST00000593168 NKD1Q969G9 470 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 EFHD2Q96C19 240 aaPredicted RBP12.38□□□□□ -0.43
VMP1-217ENST00000593168 DHRS1Q96LJ7 313 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 ZNF597Q96LX8 424 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 LMF1Q96S06 567 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 GABARAPL1Q9H0R8 117 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 ACER3Q9NUN7 267 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 RLIMQ9NVW2 624 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 USE1Q9NZ43 259 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 A4GNTQ9UNA3 340 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 C15orf41Q9Y2V0 281 aa12.38□□□□□ -0.43
VMP1-217ENST00000593168 TESMINQ9Y4I5 508 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms