RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 DUSP5Q16690 384 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 TMEM201Q5SNT2 666 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 XKRXQ6PP77 449 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 SHISA2Q6UWI4 295 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 GALNT10Q86SR1 603 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 PLCZ1Q86YW0 608 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 CLECL1Q8IZS7 167 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 CCDC197Q8NCU1 140 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 OR4K17Q8NGC6 315 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 OR4A15Q8NGL6 344 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 OR5AK3PQ8NH89 298 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 OR14L1PQ8NHC6 308 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 ADAMTS15Q8TE58 950 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 PHF10Q8WUB8 498 aaKnown RBP9.44□□□□□ -0.9
SDF2-208ENST00000589788 ITLN2Q8WWU7 325 aaPredicted RBP9.44□□□□□ -0.9
SDF2-208ENST00000589788 TESCQ96BS2 214 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 NTNG2Q96CW9 530 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 OTUB1Q96FW1 271 aaPredicted RBP9.44□□□□□ -0.9
SDF2-208ENST00000589788 OR52B2Q96RD2 323 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 STACQ99469 402 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 G6PC3Q9BUM1 346 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 BTBD2Q9BX70 525 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 ACTRT3Q9BYD9 372 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 TBL1XR1Q9BZK7 514 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 DUSP22Q9NRW4 184 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 FAM120CQ9NX05 1096 aaKnown RBP9.44□□□□□ -0.9
SDF2-208ENST00000589788 ALKBH4Q9NXW9 302 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 COQ3Q9NZJ6 369 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.44□□□□□ -0.9
SDF2-208ENST00000589788 SPRR3Q9UBC9 169 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 DKKL1Q9UK85 242 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 PCDHGB3Q9Y5G1 929 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 RNF103-CHMP3A0A140T963 221 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 PRSS51A0A1B0GVH4 220 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 ADAM10O14672 748 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 ANKRD28O15084 1053 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 FADS1O60427 444 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 WDR1O75083 606 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 KCNK2O95069 426 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 UTS2O95399 124 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 CPSF4O95639 269 aaKnown RBP9.43□□□□□ -0.9
SDF2-208ENST00000589788 GABRA1P14867 456 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 IDO1P14902 403 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 HPGDP15428 266 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 ENDOUP21128 410 aaKnown RBP9.43□□□□□ -0.9
SDF2-208ENST00000589788 UFM1P61960 85 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 ADORA2A-AS1P86434 159 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 SF3A3Q12874 501 aaKnown RBP eCLIP9.43□□□□□ -0.9
SDF2-208ENST00000589788 FAM174BQ3ZCQ3 159 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 EIPR1Q53HC9 387 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 EMC4Q5J8M3 183 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 SPANXN4Q5MJ08 99 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 ZBTB37Q5TC79 503 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 METTL21CQ5VZV1 264 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 OR5M10Q6IEU7 315 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 CDC73Q6P1J9 531 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 NCCRP1Q6ZVX7 275 aaPredicted RBP9.43□□□□□ -0.9
SDF2-208ENST00000589788 YRDCQ86U90 279 aaKnown RBP9.43□□□□□ -0.9
SDF2-208ENST00000589788 ANKRD46Q86W74 232 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 WDSUB1Q8N9V3 476 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 FAM83FQ8NEG4 500 aaPredicted RBP9.43□□□□□ -0.9
SDF2-208ENST00000589788 RNF138Q8WVD3 245 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 CDS1Q92903 461 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 DMRTA2Q96SC8 542 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 MRPL18Q9H0U6 180 aaKnown RBP9.43□□□□□ -0.9
SDF2-208ENST00000589788 PIGUQ9H490 435 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 GSX1Q9H4S2 264 aaPredicted RBP9.43□□□□□ -0.9
SDF2-208ENST00000589788 GIN1Q9NXP7 522 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 FLRT3Q9NZU0 649 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 SLC6A5Q9Y345 797 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 GPR45Q9Y5Y3 372 aa9.43□□□□□ -0.9
SDF2-208ENST00000589788 PHF3Q92576 2039 aaKnown RBP9.42□□□□□ -0.9
SDF2-208ENST00000589788 UBDO15205 165 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 DCTN3O75935 186 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 ACTL6AO96019 429 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 IGKV1D-16P01601 117 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 HOXD4P09016 255 aaPredicted RBP9.42□□□□□ -0.9
SDF2-208ENST00000589788 AGAP20933 346 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 ATP6V1C1P21283 382 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 LCN1P31025 176 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 SRD5A2P31213 254 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 GAS1P54826 345 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 WNT3P56703 355 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 CRYZQ08257 329 aaKnown RBP9.42□□□□□ -0.9
SDF2-208ENST00000589788 C17orf67Q0P5P2 114 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 PMPCAQ10713 525 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 ART3Q13508 389 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 SF3B4Q15427 424 aaKnown RBP eCLIP9.42□□□□□ -0.9
SDF2-208ENST00000589788 GSTA3Q16772 222 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.42□□□□□ -0.9
SDF2-208ENST00000589788 GRAMD1BQ3KR37 738 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 PDCD4Q53EL6 469 aaKnown RBP9.42□□□□□ -0.9
SDF2-208ENST00000589788 CCNJQ5T5M9 372 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 B3GNT6Q6ZMB0 384 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 MARCH3Q86UD3 253 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 IFNEQ86WN2 208 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 PM20D2Q8IYS1 436 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 CELF2-AS1Q8N7Q2 184 aa9.42□□□□□ -0.9
SDF2-208ENST00000589788 GLB1L3Q8NCI6 653 aaPredicted RBP9.42□□□□□ -0.9
SDF2-208ENST00000589788 OR10Q1Q8NGQ4 319 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms