RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 KLF4O43474 513 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 FRS3O43559 492 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 PRKYO43930 277 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 FCMRO60667 390 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 TPST2O60704 377 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 CBFA2T3O75081 653 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 LDB3O75112 727 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 NSA2O95478 260 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 SCG5P05408 212 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 IGFBP1P08833 259 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 FTH1P19P0C7X4 201 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 MYL12AP19105 171 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 TRHRP34981 398 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 IDUAP35475 653 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 SOX18P35713 384 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 MLLT3P42568 568 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 GIPRP48546 466 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 EPHA4P54764 986 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 PSMD4P55036 377 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 MAZP56270 477 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 PPP1CAP62136 330 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 RACK1P63244 317 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 IGLV3-21P80748 117 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 ID2Q02363 134 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 MGAT2Q10469 447 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 RAB40BQ12829 278 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 MAP4K2Q12851 820 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 FOXD4Q12950 439 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 MLLT11Q13015 90 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 TMED1Q13445 227 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 C1orf61Q13536 156 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 MED22Q15528 200 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 SNAPC1Q16533 368 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 TSTQ16762 297 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 RGS21Q2M5E4 152 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 HLA-BQ31612 363 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 ZNF404Q494X3 552 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 TRMT12Q53H54 448 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 SYT14P1Q58G82 188 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 RPL13AP3Q6NVV1 102 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 TUBA3EQ6PEY2 450 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 ZNF620Q6ZNG0 422 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 GDF7Q7Z4P5 450 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 WDR53Q7Z5U6 358 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 C17orf82Q86X59 251 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 KIF18BQ86Y91 864 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 GALNT12Q8IXK2 581 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 RNF113BQ8IZP6 322 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 CLIP4Q8N3C7 705 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 MFSD4AQ8N468 514 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 PROKR2Q8NFJ6 384 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 OR5T3Q8NGG3 340 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 B4GALNT2Q8NHY0 566 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 C1orf216Q8TAB5 229 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 OIT3Q8WWZ8 545 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 ADAMTS14Q8WXS8 1223 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 ZCCHC14Q8WYQ9 949 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 RPL3LQ92901 407 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 FGF11Q92914 225 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 RFKQ969G6 155 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 ANKRD9Q96BM1 317 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 HSPBAP1Q96EW2 488 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 FAM46AQ96IP4 442 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 LRR1Q96L50 414 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 ZNF578Q96N58 590 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 ZNF582Q96NG8 517 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 ZNF285Q96NJ3 590 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 OPALINQ96PE5 141 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 TAPBPLQ9BX59 468 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 NXF2Q9GZY0 626 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 FGF20Q9NP95 211 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 CTPS2Q9NRF8 586 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 NLGN3Q9NZ94 848 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 SEC14L4Q9UDX3 406 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 EPHA6Q9UF33 1036 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 KLK13Q9UKR3 277 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 CFL2Q9Y281 166 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 EXOSC1Q9Y3B2 195 aaKnown RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 BOLA1Q9Y3E2 137 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 ASPMQ8IZT6 3477 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 AKAP13Q12802 2813 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 CHD6Q8TD26 2715 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 TMEM131Q92545 1883 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 A0A1B0GVT2 93 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 TMEM129A0AVI4 362 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 CDHR4A6H8M9 788 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 TLCD2A6NGC4 264 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 ZNF749O43361 778 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 CHST10O43529 356 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 TLX2O43763 284 aaPredicted RBP9.23□□□□□ -0.93
VPS25-202ENST00000589219 BRINP1O60477 761 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 PRAMEF2O60811 474 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 DNAJB6O75190 326 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 CSO75390 466 aaKnown RBP9.23□□□□□ -0.93
VPS25-202ENST00000589219 CBX7O95931 251 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 HMGN1P05114 100 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 HSMCR30P0CW71 290 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 TYRP1P17643 537 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 SOX6P35712 828 aa9.23□□□□□ -0.93
VPS25-202ENST00000589219 CSNK1EP49674 416 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms