RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 RNF113BQ8IZP6 322 aaKnown RBP12.47□□□□□ -0.41
KDM4B-208ENST00000589104 MFSD9Q8NBP5 474 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 ZBTB44Q8NCP5 570 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 YIPF5Q969M3 257 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 DIRAS2Q96HU8 199 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 LRFN5Q96NI6 719 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 EVA1AQ9H8M9 152 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 TAC3Q9UHF0 121 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 SLC17A4Q9Y2C5 497 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 ATG4BQ9Y4P1 393 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 LAMA2P24043 3122 aaKnown RBP12.47□□□□□ -0.41
KDM4B-208ENST00000589104 RFXAPO00287 272 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 TNFSF14O43557 240 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 HMGN2P05204 90 aaKnown RBP12.47□□□□□ -0.41
KDM4B-208ENST00000589104 SERPIND1P05546 499 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 SLC2A2P11168 524 aaPredicted RBP12.47□□□□□ -0.41
KDM4B-208ENST00000589104 P2RY2P41231 377 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 CAV3P56539 151 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 SPRYD4Q8WW59 207 aaPredicted RBP12.47□□□□□ -0.41
KDM4B-208ENST00000589104 RAB7BQ96AH8 199 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 SLC35A4Q96G79 324 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 PIGUQ9H490 435 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 SLC28A3Q9HAS3 691 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 EMC3Q9P0I2 261 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 SLC23A1Q9UHI7 598 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 TP53BP1Q12888 1972 aaPredicted RBP12.47□□□□□ -0.41
KDM4B-208ENST00000589104 LAMA3Q16787 3333 aa12.47□□□□□ -0.41
KDM4B-208ENST00000589104 EDDM13A0A1B0GTR0 161 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 FEZF1A0PJY2 475 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 SLC9A3R1O14745 358 aaPredicted RBP12.46□□□□□ -0.41
KDM4B-208ENST00000589104 RFPL3O75679 317 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 ASGR2P07307 311 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 AGBL4Q5VU57 503 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 CD276Q5ZPR3 534 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 CDC73Q6P1J9 531 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 OLIG3Q7RTU3 272 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 TOE1Q96GM8 510 aaKnown RBP12.46□□□□□ -0.41
KDM4B-208ENST00000589104 HCAR1Q9BXC0 346 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 ENKD1Q9H0I2 346 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 APOBEC3BQ9UH17 382 aaKnown RBP12.46□□□□□ -0.41
KDM4B-208ENST00000589104 PLAGL1Q9UM63 463 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 C5orf67F2Z3F1 127 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 NR2F6P10588 404 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 HOXB3P14651 431 aaPredicted RBP12.46□□□□□ -0.41
KDM4B-208ENST00000589104 FCARP24071 287 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 E2F1Q01094 437 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 HSPB3Q12988 150 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 FGL2Q14314 439 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 TRAM1Q15629 374 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 TCEAL5Q5H9L2 206 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 ZNF836Q6ZNA1 936 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 C17orf64Q86WR6 236 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 TIGD4Q8IY51 512 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 OR4F15Q8NGB8 312 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 CDC26Q8NHZ8 85 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 TIMM29Q9BSF4 260 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 OSGEPL1Q9H4B0 414 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 NPDC1Q9NQX5 325 aaPredicted RBP12.46□□□□□ -0.41
KDM4B-208ENST00000589104 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 SLC9A8Q9Y2E8 581 aa12.46□□□□□ -0.41
KDM4B-208ENST00000589104 MEIKINA0A087WXM9 373 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 LINC01387J3KSC0 135 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 CBX5P45973 191 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 CCL23P55773 120 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 ELAVL3Q14576 367 aaKnown RBP12.46□□□□□ -0.42
KDM4B-208ENST00000589104 GPR68Q15743 365 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 PDZK1Q5T2W1 519 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 CFAP77Q6ZQR2 320 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 GIMAP1Q8WWP7 306 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 AKAP1Q92667 903 aaKnown RBP eCLIP12.46□□□□□ -0.424e-6■■■■□ 26.6
KDM4B-208ENST00000589104 RFKQ969G6 155 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 CTHRC1Q96CG8 243 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 C16orf58Q96GQ5 468 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 MS4A3Q96HJ5 214 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 ABHD1Q96SE0 405 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 FNDC11Q9BVV2 318 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 UBQLN3Q9H347 655 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 KCNK12Q9HB15 430 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 DIABLOQ9NR28 239 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 NANSQ9NR45 359 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 TM7SF3Q9NS93 570 aa12.46□□□□□ -0.42
KDM4B-208ENST00000589104 ZNF443Q9Y2A4 671 aaPredicted RBP12.46□□□□□ -0.42
KDM4B-208ENST00000589104 PCDHGA9Q9Y5G4 932 aaKnown RBP12.46□□□□□ -0.42
KDM4B-208ENST00000589104 CENPVL1A0A0U1RR11 272 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 EMC8O43402 210 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 CHST10O43529 356 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 SLC28A2O43868 658 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 PIP5K1CO60331 668 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 NCR1O76036 304 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 RHOP08100 348 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 GNSP15586 552 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 SOAT1P35610 550 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 CAPZA2P47755 286 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 CLCNKAP51800 687 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 POU4F3Q15319 338 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 CSRP2Q16527 193 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 RAET1GQ6H3X3 334 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 FAM111BQ6SJ93 734 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 VRK2Q86Y07 508 aa12.45□□□□□ -0.42
KDM4B-208ENST00000589104 MRPL43Q8N983 215 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms