RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 TMBIM4Q9HC24 238 aa17.64■□□□□ 0.41
TPM4-208ENST00000588410 MED17Q9NVC6 651 aa17.64■□□□□ 0.41
TPM4-208ENST00000588410 JKAMPQ9P055 326 aa17.64■□□□□ 0.41
TPM4-208ENST00000588410 KCNE3Q9Y6H6 103 aa17.64■□□□□ 0.41
TPM4-208ENST00000588410 CACNA1CQ13936 2221 aa17.64■□□□□ 0.41
TPM4-208ENST00000588410 PRSS51A0A1B0GVH4 220 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 TUBAL3A6NHL2 446 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 H0YC42 278 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 GTPBP1O00178 669 aaKnown RBP17.63■□□□□ 0.41
TPM4-208ENST00000588410 CPSF4O95639 269 aaKnown RBP17.63■□□□□ 0.41
TPM4-208ENST00000588410 CRHP06850 196 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 TPD52P55327 224 aaPredicted RBP17.63■□□□□ 0.41
TPM4-208ENST00000588410 CLDN20P56880 219 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 CD226Q15762 336 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 DPY19L1Q2PZI1 675 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 TMEM44Q2T9K0 475 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 SPATA19Q7Z5L4 167 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 MTERF4Q7Z6M4 381 aaKnown RBP17.63■□□□□ 0.41
TPM4-208ENST00000588410 WDR75Q8IWA0 830 aaKnown RBP17.63■□□□□ 0.41
TPM4-208ENST00000588410 ZNF614Q8N883 585 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 OR5D16Q8NGK9 328 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 RAB3IL1Q8TBN0 382 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 FIG4Q92562 907 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 TESCQ96BS2 214 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 SLC35G5Q96KT7 338 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 MARCOQ9UEW3 520 aaPredicted RBP17.63■□□□□ 0.41
TPM4-208ENST00000588410 PACSIN3Q9UKS6 424 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 ZNF175Q9Y473 711 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 CREBBPQ92793 2442 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 ABCA12Q86UK0 2595 aa17.63■□□□□ 0.41
TPM4-208ENST00000588410 NPIPA5A0A0B4J1W7 369 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 A0A1W2PNV4 684 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 NPIPA7E9PJI5 369 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 SLCO1B7G3V0H7 640 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 EIF1AYO14602 144 aaKnown RBP17.62■□□□□ 0.41
TPM4-208ENST00000588410 HDAC3O15379 428 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 NUDT14O95848 222 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 NPIPA8P0DM63 369 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 KITP10721 976 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 ME2P23368 584 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 S100A3P33764 101 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 ATP12AP54707 1039 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 CLDN15P56746 228 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 RPS26P62854 115 aaKnown RBP17.62■□□□□ 0.41
TPM4-208ENST00000588410 SORDQ00796 357 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 OGFOD2Q6N063 350 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 PPP4R4Q6NUP7 873 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 ANKRD46Q86W74 232 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 CLEC4FQ8N1N0 589 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 GTPBP8Q8N3Z3 284 aaPredicted RBP17.62■□□□□ 0.41
TPM4-208ENST00000588410 CNEP1R1Q8N9A8 125 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 TLCD1Q96CP7 247 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 PRRG4Q9BZD6 226 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 MANSC1Q9H8J5 431 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 FBN2P35556 2912 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 MYO9AB2RTY4 2548 aa17.62■□□□□ 0.41
TPM4-208ENST00000588410 ADGRG4Q8IZF6 3080 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 E9PBE3 544 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 SDHDO14521 159 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 SNNO75324 88 aaPredicted RBP17.61■□□□□ 0.41
TPM4-208ENST00000588410 SMNDC1O75940 238 aaKnown RBP eCLIP17.61■□□□□ 0.41
TPM4-208ENST00000588410 AK1P00568 194 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 FCGR2AP12318 317 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 UQCRC2P22695 453 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 EIF1AXP47813 144 aaKnown RBP17.61■□□□□ 0.41
TPM4-208ENST00000588410 RNF144AP50876 292 aaPredicted RBP17.61■□□□□ 0.41
TPM4-208ENST00000588410 NME5P56597 212 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 PON3Q15166 354 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 PLPPR5Q32ZL2 321 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 KLHL26Q53HC5 615 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 SPANXN4Q5MJ08 99 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 NXNQ6DKJ4 435 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 C16orf62Q7Z3J2 963 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 METTL25Q8N6Q8 603 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 RNF145Q96MT1 663 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 ZBTB18Q99592 522 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 POLDIP3Q9BY77 421 aaKnown RBP17.61■□□□□ 0.41
TPM4-208ENST00000588410 WDR55Q9H6Y2 383 aaPredicted RBP17.61■□□□□ 0.41
TPM4-208ENST00000588410 EXD2Q9NVH0 621 aa17.61■□□□□ 0.41
TPM4-208ENST00000588410 DNAJB12Q9NXW2 375 aaKnown RBP17.61■□□□□ 0.41
TPM4-208ENST00000588410 UQCRHLA0A096LP55 91 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 GOLGA8QA0A0J9YX86 632 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 C7orf72A4D263 438 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 GOLGA8OA6NCC3 632 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 GOLGA8NF8WBI6 632 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 ANKRD28O15084 1053 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 CTAG2O75638 210 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 TNFSF13O75888 250 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 AGR2O95994 175 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 EPHA3P29320 983 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 CHI3L1P36222 383 aaPredicted RBP17.6■□□□□ 0.41
TPM4-208ENST00000588410 EIF1P41567 113 aaKnown RBP17.6■□□□□ 0.41
TPM4-208ENST00000588410 SIRPAP78324 504 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 OCRLQ01968 901 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 ZNF117Q03924 483 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 FGFBP1Q14512 234 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 CASP8Q14790 479 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 FAM174BQ3ZCQ3 159 aa17.6■□□□□ 0.41
TPM4-208ENST00000588410 PDSS1Q5T2R2 415 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms