RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 CD226Q15762 336 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 TMEM44Q2T9K0 475 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 BEND6Q5SZJ8 279 aaPredicted RBP15.95■□□□□ 0.14
TPM4-206ENST00000587201 EEF1A1P5Q5VTE0 462 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 OR2A2Q6IF42 318 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 C6orf120Q7Z4R8 191 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 LRRC34Q8IZ02 419 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 OR8J2Q8NGG1 315 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 OR5D16Q8NGK9 328 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 OR4A15Q8NGL6 344 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 B4GALNT2Q8NHY0 566 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 PHOSPHO1Q8TCT1 267 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 FIG4Q92562 907 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 HOXD1Q9GZZ0 328 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 PIGMQ9H3S5 423 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 THAP1Q9NVV9 213 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 NKIRAS1Q9NYS0 192 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 PDZD2O15018 2839 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 PCNX3Q9H6A9 2034 aa15.95■□□□□ 0.14
TPM4-206ENST00000587201 RNF103-CHMP3A0A140T963 221 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 A0A1W2PNV4 684 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 TUBAL3A6NHL2 446 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 CPSF4O95639 269 aaKnown RBP15.94■□□□□ 0.14
TPM4-206ENST00000587201 ZNF17P17021 662 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 RPS26P62854 115 aaKnown RBP15.94■□□□□ 0.14
TPM4-206ENST00000587201 PON3Q15166 354 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 SGCBQ16585 318 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 ANXA8L1Q5VT79 327 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 ATG16L1Q676U5 607 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 MTERF4Q7Z6M4 381 aaKnown RBP15.94■□□□□ 0.14
TPM4-206ENST00000587201 ANKRD46Q86W74 232 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 CLEC4FQ8N1N0 589 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 CNEP1R1Q8N9A8 125 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 VPS37AQ8NEZ2 397 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 ACTRT2Q8TDY3 377 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 FAM222BQ8WU58 562 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 ZBTB8AQ96BR9 441 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 TESCQ96BS2 214 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 ZNF845Q96IR2 970 aaPredicted RBP15.94■□□□□ 0.14
TPM4-206ENST00000587201 SLC35G5Q96KT7 338 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 GPATCH1Q9BRR8 931 aaKnown RBP15.94■□□□□ 0.14
TPM4-206ENST00000587201 TMBIM4Q9HC24 238 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 MED17Q9NVC6 651 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 DNAJB12Q9NXW2 375 aaKnown RBP15.94■□□□□ 0.14
TPM4-206ENST00000587201 PACSIN3Q9UKS6 424 aa15.94■□□□□ 0.14
TPM4-206ENST00000587201 POLQO75417 2590 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 PRSS51A0A1B0GVH4 220 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 DUXAA6NLW8 204 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 H3BNH8 94 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 EIF1AYO14602 144 aaKnown RBP15.93■□□□□ 0.14
TPM4-206ENST00000587201 CTAG2O75638 210 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 TNFSF13O75888 250 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 CRHP06850 196 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 KITP10721 976 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 RNF144AP50876 292 aaPredicted RBP15.93■□□□□ 0.14
TPM4-206ENST00000587201 CLNS1AP54105 237 aaKnown RBP15.93■□□□□ 0.14
TPM4-206ENST00000587201 SLC18A1P54219 525 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 ATP12AP54707 1039 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 NME5P56597 212 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 SORDQ00796 357 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 DPY19L1Q2PZI1 675 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 PLPPR5Q32ZL2 321 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 PPP4R4Q6NUP7 873 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 WDR75Q8IWA0 830 aaKnown RBP15.93■□□□□ 0.14
TPM4-206ENST00000587201 GTPBP8Q8N3Z3 284 aaPredicted RBP15.93■□□□□ 0.14
TPM4-206ENST00000587201 METTL25Q8N6Q8 603 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 ZNF614Q8N883 585 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 LINC01560Q8TB33 94 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 FNDC9Q8TBE3 224 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 TLCD1Q96CP7 247 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 RNF145Q96MT1 663 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 NPAS1Q99742 590 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 POLDIP3Q9BY77 421 aaKnown RBP15.93■□□□□ 0.14
TPM4-206ENST00000587201 GALNT8Q9NY28 637 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 MARCOQ9UEW3 520 aaPredicted RBP15.93■□□□□ 0.14
TPM4-206ENST00000587201 ZNF175Q9Y473 711 aa15.93■□□□□ 0.14
TPM4-206ENST00000587201 NUP214P35658 2090 aaPredicted RBP15.93■□□□□ 0.14
TPM4-206ENST00000587201 GTPBP1O00178 669 aaKnown RBP15.92■□□□□ 0.14
TPM4-206ENST00000587201 SDHDO14521 159 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 ANKRD28O15084 1053 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 SCN2BO60939 215 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 SNNO75324 88 aaPredicted RBP15.92■□□□□ 0.14
TPM4-206ENST00000587201 SMNDC1O75940 238 aaKnown RBP eCLIP15.92■□□□□ 0.14
TPM4-206ENST00000587201 NUDT14O95848 222 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 S100A3P33764 101 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 EIF1AXP47813 144 aaKnown RBP15.92■□□□□ 0.14
TPM4-206ENST00000587201 SIRPAP78324 504 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 PHC1P78364 1004 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 ZNF117Q03924 483 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 KLHL26Q53HC5 615 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 SPANXN4Q5MJ08 99 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 OGFOD2Q6N063 350 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 VWA1Q6PCB0 445 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 GGNQ86UU5 652 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 RAB3IL1Q8TBN0 382 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 SDF2Q99470 211 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 KLHDC3Q9BQ90 382 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 PRRG4Q9BZD6 226 aa15.92■□□□□ 0.14
TPM4-206ENST00000587201 SERHL2Q9H4I8 314 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms