RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 TMEM185BQ9H7F4 350 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 FANCFQ9NPI8 374 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 AKAP10O43572 662 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 CPA3P15088 417 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 PAX1P15863 534 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 ME2P23368 584 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 AGTR1P30556 359 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 MANFP55145 182 aaKnown RBP17.3■□□□□ 0.36
TRAF4-216ENST00000586813 LIPMQ5VYY2 423 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 Q6ZSR9 355 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 BEND4Q6ZU67 534 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 PRIMA1Q86XR5 153 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 MISPQ8IVT2 679 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 CCDC63Q8NA47 563 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 OR6Y1Q8NGX8 325 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 CLHC1Q8NHS4 586 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 TMEM171Q8WVE6 324 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 OTUB1Q96FW1 271 aaPredicted RBP17.3■□□□□ 0.36
TRAF4-216ENST00000586813 KLHDC3Q9BQ90 382 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 C12orf65Q9H3J6 166 aaKnown RBP17.3■□□□□ 0.36
TRAF4-216ENST00000586813 UBQLN4Q9NRR5 601 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 ACSS1Q9NUB1 689 aaPredicted RBP17.3■□□□□ 0.36
TRAF4-216ENST00000586813 SH3BP4Q9P0V3 963 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 PRR14LQ5THK1 2151 aa17.3■□□□□ 0.36
TRAF4-216ENST00000586813 A0A0J9YW62 118 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 SCDO00767 359 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 CNOT4O95628 575 aaKnown RBP17.29■□□□□ 0.36
TRAF4-216ENST00000586813 PLAUP00749 431 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 NEFHP12036 1026 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 HPGDP15428 266 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 LCN1P31025 176 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 CRHR1P34998 444 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 CCT5P48643 541 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 RPL38P63173 70 aaKnown RBP17.29■□□□□ 0.36
TRAF4-216ENST00000586813 CD226Q15762 336 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 RFTN2Q52LD8 501 aaPredicted RBP17.29■□□□□ 0.36
TRAF4-216ENST00000586813 CPTPQ5TA50 214 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 HBMQ6B0K9 141 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 RNF165Q6ZSG1 346 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 STK32CQ86UX6 486 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 WFDC8Q8IUA0 241 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 GSPT2Q8IYD1 628 aaKnown RBP17.29■□□□□ 0.36
TRAF4-216ENST00000586813 COX18Q8N8Q8 333 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 POC1BQ8TC44 478 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 JADE3Q92613 823 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 PLPPR2Q96GM1 343 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 C16orf58Q96GQ5 468 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 TMEM204Q9BSN7 226 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 OR10A4Q9H209 315 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 TUBB1Q9H4B7 451 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 CXorf56Q9H5V9 222 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 C12orf49Q9H741 205 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 ZNF701Q9NV72 531 aaPredicted RBP17.29■□□□□ 0.36
TRAF4-216ENST00000586813 FBXO34Q9NWN3 711 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 FIS1Q9Y3D6 152 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 JMJD1CQ15652 2540 aa17.29■□□□□ 0.36
TRAF4-216ENST00000586813 HIVEP2P31629 2446 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 A0A1W2PQD3 144 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 AZIN1O14977 448 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 SHBGP04278 402 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 TUBBP07437 444 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 ALOX5P09917 674 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 PSMB1P20618 241 aaKnown RBP17.28■□□□□ 0.36
TRAF4-216ENST00000586813 SERPINB4P48594 390 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 ZNF844Q08AG5 666 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 EXOSC6Q5RKV6 272 aaKnown RBP17.28■□□□□ 0.36
TRAF4-216ENST00000586813 CCNJQ5T5M9 372 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 ZCCHC12Q6PEW1 402 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 CEP112Q8N8E3 955 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 B4GALNT2Q8NHY0 566 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 KLHL15Q96M94 604 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 BAIAP2L1Q9UHR4 511 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 GPR52Q9Y2T5 361 aa17.28■□□□□ 0.36
TRAF4-216ENST00000586813 USF3Q68DE3 2245 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 HS3ST1O14792 307 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 LSM1O15116 133 aaKnown RBP17.27■□□□□ 0.36
TRAF4-216ENST00000586813 TMCC2O75069 709 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 LINGO3P0C6S8 592 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 LINC00032P0C843 101 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 NID1P14543 1247 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 EFNA1P20827 205 aaPredicted RBP17.27■□□□□ 0.36
TRAF4-216ENST00000586813 PRIM2P49643 509 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 FOXF1Q12946 379 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 ZNF239Q16600 458 aaKnown RBP17.27■□□□□ 0.36
TRAF4-216ENST00000586813 PDSS1Q5T2R2 415 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 KANK2Q63ZY3 851 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 TRABD2AQ86V40 505 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 LILRA2Q8N149 483 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 ZNF611Q8N823 705 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 RNF128Q8TEB7 428 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 OSTF1Q92882 214 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 MTERF3Q96E29 417 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 FAM120BQ96EK7 910 aaKnown RBP17.27■□□□□ 0.36
TRAF4-216ENST00000586813 RHOXF2Q9BQY4 288 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 BTBD2Q9BX70 525 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 SIRT3Q9NTG7 399 aaPredicted RBP17.27■□□□□ 0.36
TRAF4-216ENST00000586813 TMED5Q9Y3A6 229 aa17.27■□□□□ 0.36
TRAF4-216ENST00000586813 FREM1Q5H8C1 2179 aa17.26■□□□□ 0.35
TRAF4-216ENST00000586813 INAFM1C9JVW0 142 aa17.26■□□□□ 0.35
TRAF4-216ENST00000586813 COPEO14579 308 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms