RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 GFRA1P56159 465 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 CLDN8P56748 225 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 FAM27E3Q08E93 113 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 NNATQ16517 81 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 PRICKLE4Q2TBC4 344 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 AGKQ53H12 422 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 SPIN4Q56A73 249 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 NOXRED1Q6NXP6 359 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 PRIMA1Q86XR5 153 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 MEIOBQ8N635 442 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 CNEP1R1Q8N9A8 125 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 WDSUB1Q8N9V3 476 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 GLB1L3Q8NCI6 653 aaPredicted RBP9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 KLHL29Q96CT2 875 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 PERPQ96FX8 193 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 APIPQ96GX9 242 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 WFIKKN1Q96NZ8 548 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 COL21A1Q96P44 957 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 HBEGFQ99075 208 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 REPIN1Q9BWE0 567 aaKnown RBP9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 ITPAQ9BY32 194 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 EFCAB1Q9HAE3 211 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 GALNT9Q9HCQ5 603 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 FANCFQ9NPI8 374 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 KLHL28Q9NXS3 571 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 WBP11Q9Y2W2 641 aaKnown RBP9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 PCDHA9Q9Y5H5 950 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 ZNF780BQ9Y6R6 833 aa9.71□□□□□ -0.86
CSNK1D-226ENST00000585026 A0A1W2PP18 115 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 A0A1W2PS29 197 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 FRG2CA6NGY1 282 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 SLC22A20A6NK97 555 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 KIAA1324LA8MWY0 1029 aaPredicted RBP9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 DEFB108AA8MXU0 73 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 LINC01387J3KSC0 135 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 TO15178 435 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 GYG2O15488 501 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 GSC2O15499 205 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 HCRTR2O43614 444 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 UGT2B11O75310 529 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 NPPAP01160 153 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 KRT16P08779 473 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 BCKDHAP12694 445 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 S1PR1P21453 382 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 DPP4P27487 766 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 SOX18P35713 384 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 FEN1P39748 380 aaKnown RBP9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 PTGDSP41222 190 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 STARP49675 285 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 DNAL1Q4LDG9 190 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 SLC48A1Q6P1K1 146 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 FAM111BQ6SJ93 734 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 HACD2Q6Y1H2 254 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 RINLQ6ZS11 566 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 PLEKHM3Q6ZWE6 761 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 CXXC5Q7LFL8 322 aaKnown RBP9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 SNX32Q86XE0 403 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 SAMD14Q8IZD0 417 aaPredicted RBP9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 CIARTQ8N365 385 aaPredicted RBP9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 METTL4Q8N3J2 472 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 RBM15BQ8NDT2 890 aaKnown RBP9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 OR4K17Q8NGC6 315 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 CTHRC1Q96CG8 243 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 STARD4Q96DR4 205 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 ZNF845Q96IR2 970 aaPredicted RBP9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 MARK4Q96L34 752 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 MDFIQ99750 246 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 GSX2Q9BZM3 304 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 SDHAF3Q9NRP4 125 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 NDE1Q9NXR1 346 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 MAT2BQ9NZL9 334 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 CCDC167Q9P0B6 97 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 NDUFAF1Q9Y375 327 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 WIF1Q9Y5W5 379 aa9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 NSD1Q96L73 2696 aaPredicted RBP9.7□□□□□ -0.86
CSNK1D-226ENST00000585026 FBP2O00757 339 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 NCKAP5O14513 1909 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 EMC8O43402 210 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 CNOT4O95628 575 aaKnown RBP9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 TGM6O95932 706 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 IL6P05231 212 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 FREM3P0C091 2139 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 PPP3CBP16298 524 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 SDC1P18827 310 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 PRPS1L1P21108 318 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 IL12AP29459 219 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 IL12BP29460 328 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 UGT2B10P36537 528 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 GSTM5P46439 218 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 POLR2JP52435 117 aaKnown RBP9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 DSCR4P56555 118 aaPredicted RBP9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 CLDN18P56856 261 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 RPS3AP61247 264 aaKnown RBP9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 UFM1P61960 85 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 TRA2BP62995 288 aaKnown RBP9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 RPL38P63173 70 aaKnown RBP9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 RAE1P78406 368 aaKnown RBP9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 ACSM2AQ08AH3 577 aa9.69□□□□□ -0.86
CSNK1D-226ENST00000585026 EXOSC7Q15024 291 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms