RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 XIRP2A4UGR9 3374 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM272A0A1B0GTI8 110 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 LILRA5A6NI73 299 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 A6NNC1 897 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 MEI4A8MW99 385 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TLR4O00206 839 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 MGST3O14880 152 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNHIT1O43257 154 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF208O43345 1280 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 COCHO43405 550 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SMAD6O43541 496 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 LATO43561 262 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 VPS26AO75436 327 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SYNGR4O95473 234 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PRAMEF12O95522 483 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 LDLRP01130 860 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TNFP01375 233 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ATP1A1P05023 1023 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PLEKP08567 350 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PNMA6AP0CW24 399 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SERPINB5P36952 375 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TNFSF9P41273 254 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SERPINB9P50453 376 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 MAP3K7CLP57077 242 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PHEXP78562 749 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ABATP80404 500 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SRYQ05066 204 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 BCL2L1Q07817 233 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 FGL1Q08830 312 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ADIGQ0VDE8 80 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TRAP1Q12931 704 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PDE7AQ13946 482 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC36A3Q495N2 470 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CCNYL2Q5T2Q4 361 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ARMC12Q5T9G4 340 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 MARC1Q5VT66 337 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 KCTD11Q693B1 232 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HIST2H2AA3Q6FI13 130 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF534Q76KX8 674 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 C16orf62Q7Z3J2 963 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC26A11Q86WA9 606 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HORMAD1Q86X24 394 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 GPALPP1Q8IXQ4 340 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 BEST3Q8N1M1 668 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PRSS35Q8N3Z0 413 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 GBP7Q8N8V2 638 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TTLQ8NG68 377 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF564Q8TBZ8 553 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ACTRT1Q8TDG2 376 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 RNF128Q8TEB7 428 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 DDI1Q8WTU0 396 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TMED6Q8WW62 240 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CDKL2Q92772 493 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PIGTQ969N2 578 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PHF21BQ96EK2 531 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 MS4A14Q96JA4 679 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF578Q96N58 590 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ANKRD27Q96NW4 1050 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HAUS8Q9BT25 410 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 FUNDC2Q9BWH2 189 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 NLNQ9BYT8 704 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF350Q9GZX5 532 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SPRTNQ9H040 489 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 IQCGQ9H095 443 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM245Q9H330 911 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SMYD3Q9H7B4 428 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ROPN1Q9HAT0 212 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 FANCEQ9HB96 536 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 NOX4Q9NPH5 578 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 YAE1D1Q9NRH1 226 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 DDIT4Q9NX09 232 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SMARCAL1Q9NZC9 954 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 RHCGQ9UBD6 479 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TRMT6Q9UJA5 497 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SPACA6W5XKT8 324 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CFAP47Q6ZTR5 3102 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 C5orf42Q9H799 3197 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 IGSF10Q6WRI0 2623 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A0U1RQS6 177 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HEATR9A2RTY3 570 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 C4orf47A7E2U8 309 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 GOLGA8SH3BPF8 625 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PES1O00541 588 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 LIN7AO14910 233 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 TPST2O60704 377 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PALMO75781 387 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 SEC24AO95486 1093 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CALCAP01258 141 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PRB1P04280 392 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 MPC1LP0DKB6 136 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 THRBP10828 461 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF10P21506 573 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 CXCR2P25025 360 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PRDX6P30041 224 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 LCN1P31025 176 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 DCTDP32321 178 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 PITPNBP48739 271 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ERVPABLB-1P60509 514 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 ERVK11-1P61568 191 aa1.75□□□□□ -2.13
SMCHD1-211ENST00000584897 HSF2Q03933 536 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms