RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 GPAT3Q53EU6 434 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 OLFM4Q6UX06 510 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 ZNF433Q8N7K0 673 aaPredicted RBP2.44□□□□□ -2.02
COPS3-217ENST00000583160 NAT8LQ8N9F0 302 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 OR4F17Q8NGA8 305 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 GOT1L1Q8NHS2 421 aaPredicted RBP2.44□□□□□ -2.02
COPS3-217ENST00000583160 SRSF12Q8WXF0 261 aaKnown RBP2.44□□□□□ -2.02
COPS3-217ENST00000583160 C11orf24Q96F05 449 aaPredicted RBP2.44□□□□□ -2.02
COPS3-217ENST00000583160 CFAP36Q96G28 342 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 ZBED3Q96IU2 234 aaPredicted RBP2.44□□□□□ -2.02
COPS3-217ENST00000583160 OR4F4Q96R69 305 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 CCSER1Q9C0I3 900 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 TSPYL1Q9H0U9 437 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 NANOGQ9H9S0 305 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 ZNF331Q9NQX6 463 aaPredicted RBP2.44□□□□□ -2.02
COPS3-217ENST00000583160 PNPLA3Q9NST1 481 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 ABCB8Q9NUT2 735 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 CNIH4Q9P003 139 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 KLHDC2Q9Y2U9 406 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 MRPS2Q9Y399 296 aaKnown RBP2.44□□□□□ -2.02
COPS3-217ENST00000583160 RTL9Q8NET4 1388 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 COL4A1P02462 1669 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 A0A1B0GUL6 1792 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 PAPPA2Q9BXP8 1791 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 ABCC4O15439 1325 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 SH3TC1Q8TE82 1336 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 IGLV3-16A0A075B6K0 115 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 CHEK1O14757 476 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 TNRC18O15417 2968 aaPredicted RBP2.43□□□□□ -2.02
COPS3-217ENST00000583160 LATO43561 262 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 PCCAP05165 728 aaPredicted RBP2.43□□□□□ -2.02
COPS3-217ENST00000583160 PTBP1P26599 531 aaKnown RBP eCLIP2.43□□□□□ -2.02
COPS3-217ENST00000583160 LINC00315P59091 139 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 ZNF45Q02386 682 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 BCL2L1Q07817 233 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 CAMK4Q16566 473 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 CLPPQ16740 277 aaPredicted RBP2.43□□□□□ -2.02
COPS3-217ENST00000583160 UFSP1Q6NVU6 142 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 KCTD9Q7L273 389 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 COPS6Q7L5N1 327 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 BBS1Q8NFJ9 593 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 OR4A16Q8NH70 328 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 P3H4Q92791 437 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 DLX4Q92988 240 aaPredicted RBP2.43□□□□□ -2.02
COPS3-217ENST00000583160 IL22RA2Q969J5 263 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 STARD4Q96DR4 205 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 CARD9Q9H257 536 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 HYPKQ9NX55 129 aa2.43□□□□□ -2.02
COPS3-217ENST00000583160 TRMT6Q9UJA5 497 aaKnown RBP2.43□□□□□ -2.02
COPS3-217ENST00000583160 BARX2Q9UMQ3 279 aaPredicted RBP2.43□□□□□ -2.02
COPS3-217ENST00000583160 MKI67P46013 3256 aaKnown RBP2.43□□□□□ -2.02
COPS3-217ENST00000583160 BRCA2P51587 3418 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 COL1A1P02452 1464 aaPredicted RBP2.42□□□□□ -2.02
COPS3-217ENST00000583160 MED23Q9ULK4 1368 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 TRBV7-9A0A0J9YWB2 115 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 DFNA5O60443 496 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 MMP23AO75900 390 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 HPNP05981 417 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 HIST1H2AGP0C0S8 130 aaPredicted RBP2.42□□□□□ -2.02
COPS3-217ENST00000583160 GABRR1P24046 479 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 TCF7P36402 384 aaPredicted RBP2.42□□□□□ -2.02
COPS3-217ENST00000583160 FKBP1AP62942 108 aaKnown RBP2.42□□□□□ -2.02
COPS3-217ENST00000583160 EIF2B1Q14232 305 aaKnown RBP2.42□□□□□ -2.02
COPS3-217ENST00000583160 PKN2Q16513 984 aaKnown RBP2.42□□□□□ -2.02
COPS3-217ENST00000583160 FUT11Q495W5 492 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 HIST2H2AA3Q6FI13 130 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 IL34Q6ZMJ4 242 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 PRSS42Q7Z5A4 293 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 SLC22A16Q86VW1 577 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.42□□□□□ -2.02
COPS3-217ENST00000583160 HIST1H2ACQ93077 130 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 GPR137Q96N19 417 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 CACNG6Q9BXT2 260 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 COPS7BQ9H9Q2 264 aaPredicted RBP2.42□□□□□ -2.02
COPS3-217ENST00000583160 TRMT112Q9UI30 125 aaKnown RBP2.42□□□□□ -2.02
COPS3-217ENST00000583160 PURGQ9UJV8 347 aaKnown RBP2.42□□□□□ -2.02
COPS3-217ENST00000583160 ENTPD4Q9Y227 616 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 LIPT1Q9Y234 373 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 ZNF175Q9Y473 711 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 HTTP42858 3142 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 CENPFP49454 3210 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 MYO3BQ8WXR4 1341 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 MAPK8IP3Q9UPT6 1336 aa2.42□□□□□ -2.02
COPS3-217ENST00000583160 KIAA0100Q14667 2235 aaKnown RBP2.41□□□□□ -2.02
COPS3-217ENST00000583160 SLC28A1O00337 649 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 SDC3O75056 442 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 ZNF254O75437 659 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 GPX5O75715 221 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 IGSF6O95976 241 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 UROSP10746 265 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 RPS2P15880 293 aaKnown RBP2.41□□□□□ -2.02
COPS3-217ENST00000583160 FERP16591 822 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 CTNNB1P35222 781 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 NF2P35240 595 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 PPOXP50336 477 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 RPL32P62910 135 aaKnown RBP2.41□□□□□ -2.02
COPS3-217ENST00000583160 MPPED2Q15777 294 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 IFI44LQ53G44 452 aa2.41□□□□□ -2.02
COPS3-217ENST00000583160 OR2B11Q5JQS5 317 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms