RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 UBL4BQ8N7F7 174 aa9.59□□□□□ -0.87
GGA3-206ENST00000578773 GATSQ8NAP1 163 aa9.59□□□□□ -0.87
GGA3-206ENST00000578773 FAM45AQ8TCE6 357 aa9.59□□□□□ -0.87
GGA3-206ENST00000578773 KLHL15Q96M94 604 aa9.59□□□□□ -0.87
GGA3-206ENST00000578773 RBM4BQ9BQ04 359 aaKnown RBP9.59□□□□□ -0.87
GGA3-206ENST00000578773 CAPS2Q9BXY5 557 aa9.59□□□□□ -0.87
GGA3-206ENST00000578773 PAQR5Q9NXK6 330 aaPredicted RBP9.59□□□□□ -0.87
GGA3-206ENST00000578773 PRODH2Q9UF12 536 aa9.59□□□□□ -0.87
GGA3-206ENST00000578773 PSAT1Q9Y617 370 aa9.59□□□□□ -0.87
GGA3-206ENST00000578773 SOX21Q9Y651 276 aaPredicted RBP9.59□□□□□ -0.87
GGA3-206ENST00000578773 A0A1W2PRB8 838 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 KLF11O14901 512 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 PRKD3O94806 890 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 TTC4O95801 387 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 ANGPTL1O95841 491 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 ITGA5P08648 1049 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 NTF4P34130 210 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 SERPINF1P36955 418 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 PPOXP50336 477 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 MANFP55145 182 aaKnown RBP9.58□□□□□ -0.88
GGA3-206ENST00000578773 TAS2R39P59534 338 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 LMO4P61968 165 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 GABRA6Q16445 453 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 GRHL2Q6ISB3 625 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 SLC48A1Q6P1K1 146 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 GSTA5Q7RTV2 222 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 ADAMTSL2Q86TH1 951 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 P2RY8Q86VZ1 359 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 IGDCC3Q8IVU1 814 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 CNTN4Q8IWV2 1026 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 LILRA2Q8N149 483 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 KIR3DL3Q8N743 410 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 SLC16A11Q8NCK7 471 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 TOR1AIP2Q8NFQ8 470 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 OR51F2Q8NH61 342 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 WDR60Q8WVS4 1066 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 HES6Q96HZ4 224 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 ZNF681Q96N22 645 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 LYSTQ99698 3801 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 RACGAP1Q9H0H5 632 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 TPK1Q9H3S4 243 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 PLK3Q9H4B4 646 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 SEC61A2Q9H9S3 476 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 FKRPQ9H9S5 495 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 MED17Q9NVC6 651 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 OPN4Q9UHM6 478 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 TSC22D4Q9Y3Q8 395 aa9.58□□□□□ -0.88
GGA3-206ENST00000578773 IGLV3-32A0A0A0MS00 114 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 CIB4A0PJX0 185 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 MAGEB16A2A368 324 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 IGKV1D-16P01601 117 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 KLK1P06870 262 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 OR4A8P0C604 315 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 RFX3P48380 749 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 PSG6Q00889 435 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 IL1RL1Q01638 556 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 ZP4Q12836 540 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 FOXF1Q12946 379 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 GRAMD1BQ3KR37 738 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 TEDDM1Q5T9Z0 273 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 GTF2IRD2BQ6EKJ0 949 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 TRMT10BQ6PF06 316 aaKnown RBP9.57□□□□□ -0.88
GGA3-206ENST00000578773 GTF2IRD2Q86UP8 949 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 NUDT13Q86X67 352 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 VSTM4Q8IW00 320 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 OR9A2Q8NGT5 310 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 FAM110DQ8TAY7 271 aaPredicted RBP9.57□□□□□ -0.88
GGA3-206ENST00000578773 UBASH3BQ8TF42 649 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 ZNF524Q96C55 264 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 KLHL29Q96CT2 875 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 CITED1Q99966 193 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 FRMD8P1Q9BZ68 369 aaPredicted RBP9.57□□□□□ -0.88
GGA3-206ENST00000578773 BCO1Q9HAY6 547 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 PCDHA9Q9Y5H5 950 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 NOTCH3Q9UM47 2321 aa9.57□□□□□ -0.88
GGA3-206ENST00000578773 A0A1W2PNR3 127 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 SH3PXD2BA1X283 911 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 MIF4GDA9UHW6 222 aaKnown RBP9.56□□□□□ -0.88
GGA3-206ENST00000578773 SAGP10523 405 aaPredicted RBP9.56□□□□□ -0.88
GGA3-206ENST00000578773 COL8A2P25067 703 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 PIK3CBP42338 1070 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 RAB10P61026 200 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 MSS51Q4VC12 460 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 ARL13AQ5H913 290 aaPredicted RBP9.56□□□□□ -0.88
GGA3-206ENST00000578773 ELFN2Q5R3F8 820 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 SEL1L2Q5TEA6 688 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 MYLK4Q86YV6 388 aaPredicted RBP9.56□□□□□ -0.88
GGA3-206ENST00000578773 CDK20Q8IZL9 346 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 NKAPQ8N5F7 415 aaKnown RBP9.56□□□□□ -0.88
GGA3-206ENST00000578773 ATP6V1C2Q8NEY4 427 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 OR7G2Q8NG99 324 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 OR52E4Q8NGH9 312 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.56□□□□□ -0.88
GGA3-206ENST00000578773 UBE2FQ969M7 185 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 CPNE4Q96A23 557 aaPredicted RBP9.56□□□□□ -0.88
GGA3-206ENST00000578773 SH3YL1Q96HL8 342 aaPredicted RBP9.56□□□□□ -0.88
GGA3-206ENST00000578773 REXO5Q96IC2 774 aaKnown RBP9.56□□□□□ -0.88
GGA3-206ENST00000578773 MRPL1Q9BYD6 325 aaKnown RBP9.56□□□□□ -0.88
GGA3-206ENST00000578773 CD244Q9BZW8 370 aa9.56□□□□□ -0.88
GGA3-206ENST00000578773 RAB1BQ9H0U4 201 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms