RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 GPAT3Q53EU6 434 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 C1orf146Q5VVC0 180 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 TYW3Q6IPR3 259 aaKnown RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 TCTN3Q6NUS6 607 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 FRRS1Q6ZNA5 592 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 RPS19BP1Q86WX3 136 aaKnown RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 KRT73Q86Y46 540 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 APLFQ8IW19 511 aaPredicted RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 DND1Q8IYX4 353 aaKnown RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 SLC34A3Q8N130 599 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 CLEC1AQ8NC01 280 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 BHLHE22Q8NFJ8 381 aaPredicted RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 NFKBIDQ8NI38 313 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 WDR60Q8WVS4 1066 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 RASSF5Q8WWW0 418 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 FIG4Q92562 907 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 DIO2Q92813 273 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 CCDC124Q96CT7 223 aaKnown RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 DUS3LQ96G46 650 aaKnown RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 FAM46AQ96IP4 442 aaKnown RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 NSMCE2Q96MF7 247 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 RNF145Q96MT1 663 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 SSBP4Q9BWG4 385 aaPredicted RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 TRIM15Q9C019 465 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 LHPPQ9H008 270 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 DENND2DQ9H6A0 471 aaPredicted RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 GFOD1Q9NXC2 390 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 POLHQ9Y253 713 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 ANGPT4Q9Y264 503 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 IFT52Q9Y366 437 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 WDR45Q9Y484 360 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 NPFFR2Q9Y5X5 522 aa7.37□□□□□ -1.23
COPS3-215ENST00000578317 NUP214P35658 2090 aaPredicted RBP7.37□□□□□ -1.23
COPS3-215ENST00000578317 LOC400499M0QZD8 3231 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 ZZEF1O43149 2961 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 TCRBV3S1A0A5B6 114 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 AGAP5A6NIR3 686 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 RRP8O43159 456 aaKnown RBP7.36□□□□□ -1.23
COPS3-215ENST00000578317 KIAA0513O60268 411 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 NADKO95544 446 aaPredicted RBP7.36□□□□□ -1.23
COPS3-215ENST00000578317 IGKV1D-16P01601 117 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 SCG5P05408 212 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 C8BP07358 591 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 ITGAMP11215 1152 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 ATP6V1C1P21283 382 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 ATP12AP54707 1039 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 SELENOWP63302 87 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 SRSF6Q13247 344 aaKnown RBP7.36□□□□□ -1.23
COPS3-215ENST00000578317 EFR3AQ14156 821 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 ZNF141Q15928 474 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 ZNF791Q3KP31 576 aaPredicted RBP7.36□□□□□ -1.23
COPS3-215ENST00000578317 OPN5Q6U736 354 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 CBLL1Q75N03 491 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 EIF3MQ7L2H7 374 aaKnown RBP7.36□□□□□ -1.23
COPS3-215ENST00000578317 NUP54Q7Z3B4 507 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 SPPL2CQ8IUH8 684 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 SPACA3Q8IXA5 215 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 ZNF619Q8N2I2 560 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 AMER2Q8N7J2 671 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 FBXO30Q8TB52 745 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 SLC22A8Q8TCC7 542 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 SPPL2AQ8TCT8 520 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 TMBIM1Q969X1 311 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 ZG16BQ96DA0 208 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 OTUB1Q96FW1 271 aaPredicted RBP7.36□□□□□ -1.23
COPS3-215ENST00000578317 RMND5BQ96G75 393 aaPredicted RBP7.36□□□□□ -1.23
COPS3-215ENST00000578317 NAF1Q96HR8 494 aaKnown RBP7.36□□□□□ -1.23
COPS3-215ENST00000578317 ZNF354BQ96LW1 612 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 GAL3ST4Q96RP7 486 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 RASL10BQ96S79 203 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 SECISBP2Q96T21 854 aaKnown RBP7.36□□□□□ -1.23
COPS3-215ENST00000578317 TRIM45Q9H8W5 580 aaPredicted RBP7.36□□□□□ -1.23
COPS3-215ENST00000578317 UBQLN4Q9NRR5 601 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 FBXO34Q9NWN3 711 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 TEKT2Q9UIF3 430 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 RPS6KA6Q9UK32 745 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 PRDM4Q9UKN5 801 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 SAMD4AQ9UPU9 718 aaKnown RBP7.36□□□□□ -1.23
COPS3-215ENST00000578317 APC2O95996 2303 aa7.36□□□□□ -1.23
COPS3-215ENST00000578317 A0A087WV48 116 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 TCRBV5S2A0A599 114 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 A8MUI8 341 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 WWP2O00308 870 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 ZNF354AO60765 605 aaPredicted RBP7.35□□□□□ -1.23
COPS3-215ENST00000578317 ITGA10O75578 1167 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 UGT2B17O75795 530 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 OR2J2O76002 312 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 GPIP06744 558 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 DBIP07108 87 aaKnown RBP7.35□□□□□ -1.23
COPS3-215ENST00000578317 CELA2AP08217 269 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 NCK1P16333 377 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 ENDOUP21128 410 aaKnown RBP7.35□□□□□ -1.23
COPS3-215ENST00000578317 TBXA2RP21731 343 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 RPS4Y1P22090 263 aaKnown RBP7.35□□□□□ -1.23
COPS3-215ENST00000578317 PRKAR1BP31321 381 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 KRT20P35900 424 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 KCNJ5P48544 419 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 TMED10P49755 219 aaKnown RBP7.35□□□□□ -1.23
COPS3-215ENST00000578317 HPCAP84074 193 aa7.35□□□□□ -1.23
COPS3-215ENST00000578317 CDC20Q12834 499 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms