RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 SHISA5Q8N114 240 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 ARHGEF39Q8N4T4 335 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 MARC2Q969Z3 335 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 HYLS1Q96M11 299 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 CHCHD6Q9BRQ6 235 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 SRRQ9GZT4 340 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 LYRM4Q9HD34 91 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 ZNF224Q9NZL3 707 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 PDP1Q9P0J1 537 aaPredicted RBP12.87□□□□□ -0.35
RNF43-202ENST00000577625 MUC3AQ02505 3323 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 FAM25EA8MYX2 175 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 EMC8O43402 210 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 CYP7B1O75881 506 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 TDGF1P13385 188 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 OR1E2P47887 323 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 DAPP51397 102 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 PER3P56645 1201 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 LAPTM4AQ15012 233 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 AANATQ16613 207 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 SOWAHCQ53LP3 525 aaPredicted RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 TMEM107Q6UX40 140 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 TMPRSS11AQ6ZMR5 421 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 FAM92BQ6ZTR7 304 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 SLC44A2Q8IWA5 706 aaPredicted RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 OR5D16Q8NGK9 328 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 OR9A2Q8NGT5 310 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 MYDGFQ969H8 173 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 ELP4Q96EB1 424 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 NOSIPQ9Y314 301 aaKnown RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 ZNF175Q9Y473 711 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 BDP1A6H8Y1 2624 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 LINC00854A0A1B0GVQ3 168 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 A0A1W2PRG6 482 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 PRAMEF27A3QJZ7 478 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 KIAA0513O60268 411 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 GALR3O60755 368 aaPredicted RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 WBP4O75554 376 aaKnown RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 HMGN2P05204 90 aaKnown RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 ALAS2P22557 587 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 RGS6P49758 472 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 PRKAG1P54619 331 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 GFERP55789 205 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 SIM1P81133 766 aaPredicted RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 MAB21L1Q13394 359 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 TAB1Q15750 504 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 ZNF79Q15937 498 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 TIMM50Q3ZCQ8 353 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 TEX261Q6UWH6 196 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 PAMR1Q6UXH9 720 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 GPAT4Q86UL3 456 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 COMMD7Q86VX2 200 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 MCATQ8IVS2 390 aaKnown RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 OR8H3Q8N146 312 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 LRRC25Q8N386 305 aaPredicted RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 DNAJC22Q8N4W6 341 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 TTC29Q8NA56 475 aaPredicted RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 ZNF675Q8TD23 568 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 APOBEC4Q8WW27 367 aaKnown RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 GPR137Q96N19 417 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 WDFY2Q96P53 400 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 ZNF607Q96SK3 696 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 PRMT8Q9NR22 394 aaPredicted RBP12.86□□□□□ -0.35
RNF43-202ENST00000577625 TRPC4Q9UBN4 977 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 U3KQ87 197 aa12.86□□□□□ -0.35
RNF43-202ENST00000577625 SLC35F4A4IF30 521 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 RGS5O15539 181 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 SEC14L5O43304 696 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 SLC28A2O43868 658 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 PPM1BO75688 479 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 RECKO95980 971 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 PPP2R1BP30154 601 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 MC3RP41968 323 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 RAB25P57735 213 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 LASP1Q14847 261 aaKnown RBP12.85□□□□□ -0.35
RNF43-202ENST00000577625 LTB4RQ15722 352 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 SYPL1Q16563 259 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 ZMAT1Q5H9K5 638 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 LYSMD4Q5XG99 296 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 FAHD1Q6P587 224 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 SLC25A45Q8N413 288 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 C9orf62Q8N4C0 152 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 OR4K14Q8NGD5 310 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 OR5T3Q8NGG3 340 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 VANGL1Q8TAA9 524 aaPredicted RBP12.85□□□□□ -0.35
RNF43-202ENST00000577625 XAGE5Q8WWM1 108 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 TREX2Q9BQ50 279 aaPredicted RBP12.85□□□□□ -0.35
RNF43-202ENST00000577625 C11orf54Q9H0W9 315 aaPredicted RBP12.85□□□□□ -0.35
RNF43-202ENST00000577625 RNF215Q9Y6U7 377 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 ENPP4Q9Y6X5 453 aa12.85□□□□□ -0.35
RNF43-202ENST00000577625 EFCAB10A6NFE3 127 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 TNFRSF11BO00300 401 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 RFPL3O75679 317 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 IFNW1P05000 195 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 GIMD1P0DJR0 217 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 XCR1P46094 333 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 XKP51811 444 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 CRISP3P54108 245 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 EPHA4P54764 986 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 DAB2P98082 770 aa12.84□□□□□ -0.35
RNF43-202ENST00000577625 SRSF5Q13243 272 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms