RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 SLC38A1Q9H2H9 487 aa7.84□□□□□ -1.15
SMG6-216ENST00000575176 OR51I1Q9H343 314 aa7.84□□□□□ -1.15
SMG6-216ENST00000575176 IKZF5Q9H5V7 419 aa7.84□□□□□ -1.15
SMG6-216ENST00000575176 TAS2R10Q9NYW0 307 aa7.84□□□□□ -1.15
SMG6-216ENST00000575176 SLC25A37Q9NYZ2 338 aa7.84□□□□□ -1.15
SMG6-216ENST00000575176 MED11Q9P086 117 aa7.84□□□□□ -1.15
SMG6-216ENST00000575176 PPP4R1LQ9P1A2 415 aa7.84□□□□□ -1.15
SMG6-216ENST00000575176 SUCOQ9UBS9 1254 aaKnown RBP7.84□□□□□ -1.15
SMG6-216ENST00000575176 L3MBTL1Q9Y468 752 aa7.84□□□□□ -1.15
SMG6-216ENST00000575176 CHST2Q9Y4C5 530 aa7.84□□□□□ -1.15
SMG6-216ENST00000575176 SNX8Q9Y5X2 465 aa7.84□□□□□ -1.15
SMG6-216ENST00000575176 GMEB1Q9Y692 573 aa7.84□□□□□ -1.15
SMG6-216ENST00000575176 MAP1AP78559 2803 aaPredicted RBP7.84□□□□□ -1.15
SMG6-216ENST00000575176 CCDC168Q8NDH2 2452 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 NKX2-6A6NCS4 301 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 CD8B2A6NJW9 211 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 PRSS44E7EML9 344 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 UGT2B17O75795 530 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 TGDSO95455 350 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 TGM6O95932 706 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 CHRM4P08173 479 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 ZNF17P17021 662 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 UQCRC2P22695 453 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 CHMP24386 653 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 HTR1EP28566 365 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 SHC1P29353 583 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 CHRNB4P30926 498 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 SOAT1P35610 550 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 TIMP3P35625 211 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 RFX3P48380 749 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 STARP49675 285 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 CLDN20P56880 219 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 PMPCAQ10713 525 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 TOMM34Q15785 309 aaPredicted RBP7.83□□□□□ -1.16
SMG6-216ENST00000575176 ZNF141Q15928 474 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 GSTA3Q16772 222 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 ARHGAP11BQ3KRB8 267 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 LRIF1Q5T3J3 769 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 WLSQ5T9L3 541 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 ZNF585AQ6P3V2 769 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 TNFAIP8L2Q6P589 184 aaPredicted RBP7.83□□□□□ -1.16
SMG6-216ENST00000575176 DNAJC14Q6Y2X3 702 aaPredicted RBP7.83□□□□□ -1.16
SMG6-216ENST00000575176 MSANTD1Q6ZTZ1 278 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 LACC1Q8IV20 430 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 GATSQ8NAP1 163 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 GLB1L3Q8NCI6 653 aaPredicted RBP7.83□□□□□ -1.16
SMG6-216ENST00000575176 OR5M1Q8NGP8 315 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 LILRB4Q8NHJ6 448 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 ZPLD1Q8TCW7 415 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 LRRC8CQ8TDW0 803 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 JADE3Q92613 823 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 GTF2H4Q92759 462 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 RAB8BQ92930 207 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 ABTB1Q969K4 478 aaPredicted RBP7.83□□□□□ -1.16
SMG6-216ENST00000575176 SDCCAG3Q96C92 435 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 ZG16BQ96DA0 208 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 AURKBQ96GD4 344 aaPredicted RBP7.83□□□□□ -1.16
SMG6-216ENST00000575176 SLC35A5Q9BS91 424 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 CCDC28BQ9BUN5 200 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 UCK2Q9BZX2 261 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 TCF7L2Q9NQB0 619 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 UBQLN4Q9NRR5 601 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 INTS9Q9NV88 658 aaKnown RBP7.83□□□□□ -1.16
SMG6-216ENST00000575176 MED17Q9NVC6 651 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 ARGLU1Q9NWB6 273 aaPredicted RBP7.83□□□□□ -1.16
SMG6-216ENST00000575176 JKAMPQ9P055 326 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 ZNF337Q9Y3M9 751 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 PRR14LQ5THK1 2151 aa7.83□□□□□ -1.16
SMG6-216ENST00000575176 HIVEP1P15822 2718 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 CLCA1A8K7I4 914 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 UBDO15205 165 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 DIAPH2O60879 1101 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 SLC22A3O75751 556 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 TRAPPC6AO75865 159 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 TNFSF13O75888 250 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 GSNP06396 782 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 ZCCHC18P0CG32 403 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 BMP2P12643 396 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 GABRA1P14867 456 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 DDX5P17844 614 aaKnown RBP7.82□□□□□ -1.16
SMG6-216ENST00000575176 TCEA1P23193 301 aaKnown RBP7.82□□□□□ -1.16
SMG6-216ENST00000575176 S100A3P33764 101 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 PTGER4P35408 488 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 KRT20P35900 424 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 PGM1P36871 562 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 ATP4BP51164 291 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 ATP12AP54707 1039 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 PSMD4P55036 377 aaKnown RBP7.82□□□□□ -1.16
SMG6-216ENST00000575176 AQP5P55064 265 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 CASP6P55212 293 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 FOXF1Q12946 379 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 FOXF2Q12947 444 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 FGFBP1Q14512 234 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 SYPL1Q16563 259 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 FBXL19-AS1Q494R0 122 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 GLYR1Q49A26 553 aaPredicted RBP7.82□□□□□ -1.16
SMG6-216ENST00000575176 SLC25A53Q5H9E4 307 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 PAGE3Q5JUK9 113 aa7.82□□□□□ -1.16
SMG6-216ENST00000575176 PDZK1Q5T2W1 519 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms