RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 SEMA7AO75326 666 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 GADD45GO95257 159 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 CSTAP01040 98 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 H1F0P07305 194 aaKnown RBP12.57□□□□□ -0.4
CCDC40-209ENST00000573474 FBXO45P0C2W1 286 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 ITGAMP11215 1152 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 LIFP15018 202 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 ZNF136P52737 540 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 Q0VFX4 171 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 PPP1R8Q12972 351 aaKnown RBP12.57□□□□□ -0.4
CCDC40-209ENST00000573474 CHAF1BQ13112 559 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 PIN1Q13526 163 aaPredicted RBP12.57□□□□□ -0.4
CCDC40-209ENST00000573474 GANABQ14697 944 aaKnown RBP12.57□□□□□ -0.4
CCDC40-209ENST00000573474 COLEC12Q5KU26 742 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 FNDC7Q5VTL7 733 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 TBPL2Q6SJ96 375 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 ZNF550Q7Z398 422 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 RPS19BP1Q86WX3 136 aaKnown RBP12.57□□□□□ -0.4
CCDC40-209ENST00000573474 ZNF440Q8IYI8 595 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 ARMC10Q8N2F6 343 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 SLC5A8Q8N695 610 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 PIK3C3Q8NEB9 887 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 OR4C15Q8NGM1 316 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 HGDQ93099 445 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 TMCO6Q96DC7 493 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 PRRC1Q96M27 445 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 RASL10BQ96S79 203 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 ZNF184Q99676 751 aaPredicted RBP12.57□□□□□ -0.4
CCDC40-209ENST00000573474 CDCP1Q9H5V8 836 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 DNAJB12Q9NXW2 375 aaKnown RBP12.57□□□□□ -0.4
CCDC40-209ENST00000573474 RHCGQ9UBD6 479 aa12.57□□□□□ -0.4
CCDC40-209ENST00000573474 ALG1L2C9J202 215 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 GTPBP1O00178 669 aaKnown RBP12.56□□□□□ -0.4
CCDC40-209ENST00000573474 EI24O14681 340 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 FADS1O60427 444 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 BCAS1O75363 584 aaPredicted RBP12.56□□□□□ -0.4
CCDC40-209ENST00000573474 ITGA10O75578 1167 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 OR5F1O95221 314 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 GKN3PP0CG01 181 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 EVI2BP34910 448 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 LIMS1P48059 325 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 CLK3P49761 638 aaKnown RBP12.56□□□□□ -0.4
CCDC40-209ENST00000573474 FBXW4P57775 412 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 MLF1P58340 268 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 TAS2R41P59536 307 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 HOXC5Q00444 222 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 PLAURQ03405 335 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 FOXC1Q12948 553 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 DAG1Q14118 895 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 EXOC3L2Q2M3D2 409 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 TBC1D25Q3MII6 688 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 ENTPD8Q5MY95 495 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 OTUD3Q5T2D3 398 aaPredicted RBP12.56□□□□□ -0.4
CCDC40-209ENST00000573474 DESI1Q6ICB0 168 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 H3F3CQ6NXT2 135 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 JMJD6Q6NYC1 403 aaPredicted RBP12.56□□□□□ -0.4
CCDC40-209ENST00000573474 OPN5Q6U736 354 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 LYPD8Q6UX82 237 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 APOOLQ6UXV4 268 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 PLEKHM3Q6ZWE6 761 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 DND1Q8IYX4 353 aaKnown RBP12.56□□□□□ -0.4
CCDC40-209ENST00000573474 OR52J3Q8NH60 311 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 PHOSPHO1Q8TCT1 267 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 DNAJC9Q8WXX5 260 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 FER1L6-AS2Q96M78 137 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 ALPK1Q96QP1 1244 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 RBM4BQ9BQ04 359 aaKnown RBP12.56□□□□□ -0.4
CCDC40-209ENST00000573474 ZNF559Q9BR84 538 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 RBM4Q9BWF3 364 aaKnown RBP12.56□□□□□ -0.4
CCDC40-209ENST00000573474 PRR14Q9BWN1 585 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 TBL1XR1Q9BZK7 514 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 GABARAPL1Q9H0R8 117 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 USE1Q9NZ43 259 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 PDP1Q9P0J1 537 aaPredicted RBP12.56□□□□□ -0.4
CCDC40-209ENST00000573474 TESQ9UGI8 421 aaKnown RBP12.56□□□□□ -0.4
CCDC40-209ENST00000573474 PRDM4Q9UKN5 801 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 KLK13Q9UKR3 277 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 TMCC3Q9ULS5 477 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 LRRC42Q9Y546 428 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 MAGED1Q9Y5V3 778 aaPredicted RBP12.56□□□□□ -0.4
CCDC40-209ENST00000573474 AHCTF1Q8WYP5 2266 aa12.56□□□□□ -0.4
CCDC40-209ENST00000573474 A0A1W2PRQ8 180 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 CPSF4LA6NMK7 179 aaKnown RBP12.55□□□□□ -0.4
CCDC40-209ENST00000573474 MASP2O00187 686 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 NDUFB5O43674 189 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 EIF4E2O60573 245 aaKnown RBP12.55□□□□□ -0.4
CCDC40-209ENST00000573474 HPRP00739 348 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 UBTFL6P0CB48 400 aaPredicted RBP12.55□□□□□ -0.4
CCDC40-209ENST00000573474 UBL4AP11441 157 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 PRG2P13727 222 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 ACAA2P42765 397 aaKnown RBP12.55□□□□□ -0.4
CCDC40-209ENST00000573474 HSPA13P48723 471 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 SSR4P51571 173 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 ALDH3A2P51648 485 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 AQP4P55087 323 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 ST3GAL3Q11203 375 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 DGCR6Q14129 220 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 CD226Q15762 336 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 NTRK2Q16620 822 aa12.55□□□□□ -0.4
CCDC40-209ENST00000573474 MICAQ29983 383 aa12.55□□□□□ -0.4
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