RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 KLHL26Q53HC5 615 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.71■□□□□ 0.59
CHMP6-204ENST00000572778 NSUN5P2Q63ZY6 315 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 UBQLNLQ8IYU4 475 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 ARFGAP2Q8N6H7 521 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 B4GALNT2Q8NHY0 566 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 PNPT1Q8TCS8 783 aaKnown RBP18.71■□□□□ 0.59
CHMP6-204ENST00000572778 ZPLD1Q8TCW7 415 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 ITCHQ96J02 903 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 TUBA1CQ9BQE3 449 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 PIGQQ9BRB3 760 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 KCNJ16Q9NPI9 418 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 DCTN4Q9UJW0 460 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 MKLN1Q9UL63 735 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 ZNF337Q9Y3M9 751 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 DTNAQ9Y4J8 743 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 OR2M5A3KFT3 312 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 NKX2-6A6NCS4 301 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 SHISA8B8ZZ34 492 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 C19orf84I3L1E1 186 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 GTPBP1O00178 669 aaKnown RBP18.7■□□□□ 0.58
CHMP6-204ENST00000572778 FCMRO60667 390 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 TOXO94900 526 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 PEPDP12955 493 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 POU3F2P20265 443 aaPredicted RBP18.7■□□□□ 0.58
CHMP6-204ENST00000572778 GLYR1Q49A26 553 aaPredicted RBP18.7■□□□□ 0.58
CHMP6-204ENST00000572778 C6orf10Q5SRN2 563 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 HEPHL1Q6MZM0 1159 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 MSANTD1Q6ZTZ1 278 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 MTERF4Q7Z6M4 381 aaKnown RBP18.7■□□□□ 0.58
CHMP6-204ENST00000572778 TNIP2Q8NFZ5 429 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 NPHS2Q9NP85 383 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 CARD8Q9Y2G2 431 aa18.7■□□□□ 0.58
CHMP6-204ENST00000572778 A0A087WZY1 265 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 CD8B2A6NJW9 211 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 HSPB2A8KAH6 182 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 NPIPB9F8W1W9 429 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 H3BML4 177 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 LINC01387J3KSC0 135 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 HMGN4O00479 90 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 KRT75O95678 551 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 IL2RAP01589 272 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 ZNF708P17019 499 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 MRPL19P49406 292 aaKnown RBP18.69■□□□□ 0.58
CHMP6-204ENST00000572778 ANXA11P50995 505 aaKnown RBP18.69■□□□□ 0.58
CHMP6-204ENST00000572778 ZNF41P51814 821 aaPredicted RBP18.69■□□□□ 0.58
CHMP6-204ENST00000572778 CLDN18P56856 261 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 ZNF117Q03924 483 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 HSPB2Q16082 182 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 BCL2A1Q16548 175 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 GPAT3Q53EU6 434 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 PDZK1Q5T2W1 519 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 RFWD2Q8NHY2 731 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 ROPN1LQ96C74 230 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 NMUR2Q9GZQ4 415 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 ZNF350Q9GZX5 532 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 CALHM2Q9HA72 323 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 SLC6A13Q9NSD5 602 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 MED17Q9NVC6 651 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 WDR45Q9Y484 360 aa18.69■□□□□ 0.58
CHMP6-204ENST00000572778 CLCA1A8K7I4 914 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 SEC14L5O43304 696 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 OIP5O43482 229 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 TNFRSF21O75509 655 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 NUDT14O95848 222 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 SNRPB2P08579 225 aaKnown RBP18.68■□□□□ 0.58
CHMP6-204ENST00000572778 NCF2P19878 526 aaPredicted RBP18.68■□□□□ 0.58
CHMP6-204ENST00000572778 TIMP3P35625 211 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 HPCAP84074 193 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 FUT5Q11128 374 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 COX20Q5RI15 118 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 CBLN3Q6UW01 205 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 CHMP1BQ7LBR1 199 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 LIX1LQ8IVB5 337 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 MEIOBQ8N635 442 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 ZFP90Q8TF47 636 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 SMPDL3BQ92485 455 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 KLHDC3Q9BQ90 382 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 CCDC167Q9P0B6 97 aa18.68■□□□□ 0.58
CHMP6-204ENST00000572778 NCOA6Q14686 2063 aaPredicted RBP18.68■□□□□ 0.58
CHMP6-204ENST00000572778 A0A0G2JND7 137 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 MBD3L4A6NDZ8 208 aaPredicted RBP18.67■□□□□ 0.58
CHMP6-204ENST00000572778 MBD3L3A6NE82 208 aaPredicted RBP18.67■□□□□ 0.58
CHMP6-204ENST00000572778 SERINC4A6NH21 518 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 MBD3L5A6NJ08 208 aaPredicted RBP18.67■□□□□ 0.58
CHMP6-204ENST00000572778 NR5A2O00482 541 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 HNRNPRO43390 633 aaKnown RBP18.67■□□□□ 0.58
CHMP6-204ENST00000572778 UGT2B17O75795 530 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 ZCCHC18P0CG32 403 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 CEACAM8P31997 349 aaPredicted RBP18.67■□□□□ 0.58
CHMP6-204ENST00000572778 P2RX1P51575 399 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 ZNF141Q15928 474 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 NDUFAF6Q330K2 333 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 GTDC1Q4AE62 458 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 TYW3Q6IPR3 259 aaKnown RBP18.67■□□□□ 0.58
CHMP6-204ENST00000572778 SLC2A7Q6PXP3 512 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 BLOC1S3Q6QNY0 202 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 PLXDC2Q6UX71 529 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 FUNDC1Q8IVP5 155 aa18.67■□□□□ 0.58
CHMP6-204ENST00000572778 TMCO5AQ8N6Q1 288 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms