RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 TIMM29Q9BSF4 260 aa15.12■□□□□ 0.01
RAB40B-206ENST00000571995 SLIRPQ9GZT3 109 aaKnown RBP15.12■□□□□ 0.01
RAB40B-206ENST00000571995 TMEM74BQ9NUR3 256 aa15.12■□□□□ 0.01
RAB40B-206ENST00000571995 APC2O95996 2303 aa15.12■□□□□ 0.01
RAB40B-206ENST00000571995 FNDC1Q4ZHG4 1894 aaPredicted RBP15.12■□□□□ 0.01
RAB40B-206ENST00000571995 ELOA3DA6NLF2 546 aaPredicted RBP15.12■□□□□ 0.01
RAB40B-206ENST00000571995 LINC00271P0C7V0 271 aa15.12■□□□□ 0.01
RAB40B-206ENST00000571995 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.12■□□□□ 0.01
RAB40B-206ENST00000571995 COX10Q12887 443 aa15.12■□□□□ 0.01
RAB40B-206ENST00000571995 ELOA3BQ3SY89 546 aa15.12■□□□□ 0.01
RAB40B-206ENST00000571995 ELOA3Q8NG57 546 aa15.12■□□□□ 0.01
RAB40B-206ENST00000571995 OR52I1Q8NGK6 324 aa15.12■□□□□ 0.01
RAB40B-206ENST00000571995 RFKQ969G6 155 aa15.12■□□□□ 0.01
RAB40B-206ENST00000571995 GRIP1Q9Y3R0 1128 aa15.12■□□□□ 0.01
RAB40B-206ENST00000571995 SH3D21A4FU49 640 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 SLC25A12O75746 678 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 UPK1BO75841 260 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 ACVR2AP27037 513 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 MRPL28Q13084 256 aaKnown RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 PDE7AQ13946 482 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 DCST2Q5T1A1 773 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 C1orf53Q5VUE5 145 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 KLHL36Q8N4N3 616 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 TP53I13Q8NBR0 393 aaPredicted RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 METTL2AQ96IZ6 378 aaKnown RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 THSD1Q9NS62 852 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 A4GNTQ9UNA3 340 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 TRAV6A0A075B6T7 132 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 A0A0G2JPF8 293 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 A0A1W2PQ09 198 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 ZAR1LA6NP61 321 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 HNRNPCL3B7ZW38 293 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 HNRNPCL4P0DMR1 293 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 GFERP55789 205 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 GFOD2Q3B7J2 385 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 GLCCI1Q86VQ1 547 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 RAB43Q86YS6 212 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 GNPDA2Q8TDQ7 276 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 CHPT1Q8WUD6 406 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 TEX101Q9BY14 249 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 OR52D1Q9H346 318 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 TMEM185BQ9H7F4 350 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 ACSS1Q9NUB1 689 aaPredicted RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 MYEF2Q9P2K5 600 aaKnown RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 POLR1DQ9Y2S0 133 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 ICE1Q9Y2F5 2266 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 IGHV3-20A0A0C4DH32 117 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 OR2B3O76000 313 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 TBX6O95947 436 aaPredicted RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 SLC2A2P11168 524 aaPredicted RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 APEX1P27695 318 aaKnown RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 MCATQ8IVS2 390 aaKnown RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 LRRC56Q8IYG6 542 aaPredicted RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 LINC00471Q8N535 108 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 JSRP1Q96MG2 331 aaPredicted RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 GABARAPL3Q9BY60 117 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 Q9N2J8 555 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 SEC14L4Q9UDX3 406 aa15.11■□□□□ 0.01
RAB40B-206ENST00000571995 TMA7Q9Y2S6 64 aaKnown RBP15.11■□□□□ 0.01
RAB40B-206ENST00000571995 HPGDSO60760 199 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 SEMA7AO75326 666 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 FBXO45P0C2W1 286 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 BLKP51451 505 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 QPRTQ15274 297 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 SIX5Q8N196 739 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 SAMD12Q8N8I0 201 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 GAL3ST3Q96A11 431 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 COX14Q96I36 57 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 BMFQ96LC9 184 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 SYNPO2LQ9H987 977 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 A4GALTQ9NPC4 353 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 QPCTLQ9NXS2 382 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 FBXL4Q9UKA2 621 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 METTL15A6NJ78 407 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 SLITRK5O94991 958 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 F13BP05160 661 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 RCVRNP35243 200 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 TGFBR2P37173 567 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 SCN1BQ07699 218 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 FBXO42Q6P3S6 717 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 NKD1Q969G9 470 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 ELF4Q99607 663 aaPredicted RBP15.1■□□□□ 0.01
RAB40B-206ENST00000571995 SLC38A1Q9H2H9 487 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 KIR3DX1Q9H7L2 352 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 NLKQ9UBE8 527 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 SNRNP200O75643 2136 aaKnown RBP15.1■□□□□ 0.01
RAB40B-206ENST00000571995 TVP23AA6NH52 213 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 EIF1AYO14602 144 aaKnown RBP15.1■□□□□ 0.01
RAB40B-206ENST00000571995 GSTM3P21266 225 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 MAPK14Q16539 360 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 ARHGAP40Q5TG30 622 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 GDF7Q7Z4P5 450 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 LUZP2Q86TE4 346 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 LINC00615Q96LM1 132 aaPredicted RBP15.1■□□□□ 0.01
RAB40B-206ENST00000571995 OPALINQ96PE5 141 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 MS4A4EQ96PG1 132 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 GABARAPL1Q9H0R8 117 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 MTHFD2LQ9H903 347 aaPredicted RBP15.1■□□□□ 0.01
RAB40B-206ENST00000571995 FAM60AQ9NP50 221 aa15.1■□□□□ 0.01
RAB40B-206ENST00000571995 PPIEQ9UNP9 301 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms