RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 MBD3L4A6NDZ8 208 aaPredicted RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 MBD3L3A6NE82 208 aaPredicted RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 MBD3L5A6NJ08 208 aaPredicted RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 CD8B2A6NJW9 211 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 DUXAA6NLW8 204 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 CLCA1A8K7I4 914 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 ALG1L2C9J202 215 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 H0YC42 278 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 NDUFB5O43674 189 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 EDF1O60869 148 aaKnown RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 IL2RAP01589 272 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 NGFRP08138 427 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 ZNF708P17019 499 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 CHMP24386 653 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 IL12AP29459 219 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 TIMP3P35625 211 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 MRPL19P49406 292 aaKnown RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 AGFG1P52594 562 aaKnown RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 CASP9P55211 416 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 TPD52P55327 224 aaPredicted RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 C17orf67Q0P5P2 114 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 GANABQ14697 944 aaKnown RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 SF3B4Q15427 424 aaKnown RBP eCLIP13.16□□□□□ -0.3
LITAF-208ENST00000571627 SLC25A35Q3KQZ1 300 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 DCST2Q5T1A1 773 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 ARSKQ6UWY0 536 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 MSANTD1Q6ZTZ1 278 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 C6orf120Q7Z4R8 191 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 UBQLNLQ8IYU4 475 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 TRIML2Q8N7C3 387 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 GOT1L1Q8NHS2 421 aaPredicted RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 MBD3L2Q8NHZ7 208 aaPredicted RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 SH3YL1Q96HL8 342 aaPredicted RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 MARK4Q96L34 752 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 OR7D2Q96RA2 312 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 TREX2Q9BQ50 279 aaPredicted RBP13.16□□□□□ -0.3
LITAF-208ENST00000571627 KLHDC3Q9BQ90 382 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 PTGES2Q9H7Z7 377 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 CALHM2Q9HA72 323 aa13.16□□□□□ -0.3
LITAF-208ENST00000571627 ANKHD1Q8IWZ3 2542 aaKnown RBP13.15□□□□□ -0.3
LITAF-208ENST00000571627 IGLV3-32A0A0A0MS00 114 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 OR2M5A3KFT3 312 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 H3BML4 177 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 SEC14L5O43304 696 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 AGR2O95994 175 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 HPGDP15428 266 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 POU3F2P20265 443 aaPredicted RBP13.15□□□□□ -0.3
LITAF-208ENST00000571627 MATN1P21941 496 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 DGKQP52824 942 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 DLX5P56178 289 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 SNTB1Q13884 538 aaKnown RBP13.15□□□□□ -0.3
LITAF-208ENST00000571627 CD226Q15762 336 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 POMZP3Q6PJE2 187 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 OLIG3Q7RTU3 272 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 SLC35G5Q96KT7 338 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 PANX1Q96RD7 426 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 NPAS1Q99742 590 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 EBF4Q9BQW3 602 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 RMND5AQ9H871 391 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 UBQLN4Q9NRR5 601 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 TMEM45AQ9NWC5 275 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 CLCF1Q9UBD9 225 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 VDAC3Q9Y277 283 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 ZNF337Q9Y3M9 751 aa13.15□□□□□ -0.3
LITAF-208ENST00000571627 CSMD2Q7Z408 3487 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 FAM234BA2RU67 622 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 SCDO00767 359 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 DVL2O14641 736 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 OIP5O43482 229 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 AK1P00568 194 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 ATP6V1C1P21283 382 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 CHI3L1P36222 383 aaPredicted RBP13.14□□□□□ -0.31
LITAF-208ENST00000571627 ATP4BP51164 291 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 POLR2JP52435 117 aaKnown RBP13.14□□□□□ -0.31
LITAF-208ENST00000571627 SUCLG1P53597 346 aaKnown RBP13.14□□□□□ -0.31
LITAF-208ENST00000571627 TXNL4AP83876 142 aaKnown RBP13.14□□□□□ -0.31
LITAF-208ENST00000571627 FOXF2Q12947 444 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.14□□□□□ -0.31
LITAF-208ENST00000571627 ADGRE4PQ86SQ3 457 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 DMRTC2Q8IXT2 367 aaPredicted RBP13.14□□□□□ -0.31
LITAF-208ENST00000571627 GCNT2Q8N0V5 402 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 MIPOL1Q8TD10 442 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 SMPDL3BQ92485 455 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 NEURL3Q96EH8 262 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 HOXD1Q9GZZ0 328 aa13.14□□□□□ -0.31
LITAF-208ENST00000571627 ANKRD17O75179 2603 aaKnown RBP13.14□□□□□ -0.31
LITAF-208ENST00000571627 HEATR5AQ86XA9 2040 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 CCDC154A6NI56 674 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 RFXANKO14593 260 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 TGM6O95932 706 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 C1QCP02747 245 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 TMIGD3P0DMS9 266 aaPredicted RBP13.13□□□□□ -0.31
LITAF-208ENST00000571627 PEPDP12955 493 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 CTSSP25774 331 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 UQCRC1P31930 480 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 ANXA11P50995 505 aaKnown RBP13.13□□□□□ -0.31
LITAF-208ENST00000571627 CLDN15P56746 228 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 CLDN20P56880 219 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 KRTAP10-9P60411 292 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 TLE4Q04727 773 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms