RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 TIMP3P35625 211 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 CHI3L1P36222 383 aaPredicted RBP10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 STARP49675 285 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 CLDN18P56856 261 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 IRX1P78414 480 aaPredicted RBP10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 TXNL4AP83876 142 aaKnown RBP10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 FUT5Q11128 374 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 ZNF141Q15928 474 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 TNFAIP8L2Q6P589 184 aaPredicted RBP10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 ARSKQ6UWY0 536 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 ZNF621Q6ZSS3 439 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 LACC1Q8IV20 430 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 FUNDC1Q8IVP5 155 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 GATSQ8NAP1 163 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 ZNF527Q8NB42 609 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 OR10Q1Q8NGQ4 319 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 ZFP90Q8TF47 636 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 XAGE5Q8WWM1 108 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 RAB8BQ92930 207 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 VPS33AQ96AX1 596 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 UCN2Q96RP3 112 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 SAP130Q9H0E3 1048 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 CALHM2Q9HA72 323 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 SLC52A3Q9NQ40 469 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 POLE3Q9NRF9 147 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 TMEM45AQ9NWC5 275 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 KCNE5Q9UJ90 142 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 DTNAQ9Y4J8 743 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 DCHS2Q6V1P9 2916 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 MAST4O15021 2626 aa10.02□□□□□ -0.81
SHCBP1-207ENST00000569702 A0A087WZY1 265 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 UQCRHLA0A096LP55 91 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 OR2M5A3KFT3 312 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 C7orf72A4D263 438 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 MBD3L4A6NDZ8 208 aaPredicted RBP10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 MBD3L3A6NE82 208 aaPredicted RBP10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 MBD3L5A6NJ08 208 aaPredicted RBP10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 HMGN4O00479 90 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 UGT2B17O75795 530 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 PEPDP12955 493 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 TCEA1P23193 301 aaKnown RBP10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 MAGEA8P43361 318 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 KHKP50053 298 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 ATP4BP51164 291 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 MVDP53602 400 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 CLDN15P56746 228 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 STX1BP61266 288 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 ZNF117Q03924 483 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 TFF3Q07654 80 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 RCAN2Q14206 197 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 PLPPR5Q32ZL2 321 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 TIGD2Q4W5G0 525 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 ATAD3BQ5T9A4 648 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 RAET1LQ5VY80 246 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 ZNF787Q6DD87 383 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 TYW3Q6IPR3 259 aaKnown RBP10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 BLOC1S3Q6QNY0 202 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 CBLN3Q6UW01 205 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 OLIG3Q7RTU3 272 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 C16orf62Q7Z3J2 963 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 RNF130Q86XS8 419 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 LIX1LQ8IVB5 337 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 ARFGAP2Q8N6H7 521 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 ACBD4Q8NC06 268 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 TNIP2Q8NFZ5 429 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 OR5M1Q8NGP8 315 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 B4GALNT2Q8NHY0 566 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 MBD3L2Q8NHZ7 208 aaPredicted RBP10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 PHOSPHO1Q8TCT1 267 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 OIT3Q8WWZ8 545 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 GTF2H4Q92759 462 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 ROPN1LQ96C74 230 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 SH3YL1Q96HL8 342 aaPredicted RBP10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 ITCHQ96J02 903 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 KLHDC3Q9BQ90 382 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 TUBA1CQ9BQE3 449 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 PIGQQ9BRB3 760 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 SIKE1Q9BRV8 207 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 RMND5AQ9H871 391 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 MED4Q9NPJ6 270 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 MKLN1Q9UL63 735 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 ICAM5Q9UMF0 924 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 ZNF337Q9Y3M9 751 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 NAV2Q8IVL1 2488 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 KIAA1549Q9HCM3 1950 aa10.01□□□□□ -0.81
SHCBP1-207ENST00000569702 NOTCH2Q04721 2471 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 PKDREJQ9NTG1 2253 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 CENPVL1A0A0U1RR11 272 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 SERINC4A6NH21 518 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 HSPB2A8KAH6 182 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 H0Y3Z8 333 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 H3BNH8 94 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 C19orf84I3L1E1 186 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 OIP5O43482 229 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 ATP8B1O43520 1251 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 HCRTR2O43614 444 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 GMFGO60234 142 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 KIAA0513O60268 411 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 TNFRSF21O75509 655 aa10□□□□□ -0.81
SHCBP1-207ENST00000569702 KRT75O95678 551 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms