RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	NUDT1	P36639	197 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	RBMX	P38159	391 aa	Known RBP	1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	SRP54	P61011	504 aa	Known RBP	1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	HERVK_113	P61574	105 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	GPNMB	Q14956	572 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	SYPL1	Q16563	259 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	HFE	Q30201	348 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	SLX4IP	Q5VYV7	408 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	ARMCX2	Q7L311	632 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	LCA5	Q86VQ0	697 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	SFRP1	Q8N474	314 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	MARCH1	Q8TCQ1	289 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	OR1E3	Q8WZA6	343 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	DCUN1D4	Q92564	292 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	FAM210B	Q96KR6	192 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	MBOAT4	Q96T53	435 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	DESI2	Q9BSY9	194 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	SLC17A9	Q9BYT1	436 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	NMNAT2	Q9BZQ4	307 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	PPDPF	Q9H3Y8	114 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	MID1IP1	Q9NPA3	183 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	FANCF	Q9NPI8	374 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	NECAP2	Q9NVZ3	263 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	RIMS3	Q9UJD0	308 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	TDRKH	Q9Y2W6	561 aa	Known RBP	1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	PRG3	Q9Y2Y8	225 aa	Predicted RBP	1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	CACNG2	Q9Y698	323 aa		1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	KIF26A	Q9ULI4	1882 aa	Predicted RBP	1.82	□□□□□ -2.12
UBR1-209	ENST00000569243	IGLV4-60	A0A075B6I1	120 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	KIR2DL5B	A0A0G2JN68	375 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	KIR2DL5B	A0A0G2JPC4	375 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	FAM170A	A1A519	330 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	NKX2-6	A6NCS4	301 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	ZSCAN5B	A6NJL1	495 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	TRAF3IP2	O43734	574 aa	Predicted RBP	1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	AKR7A3	O95154	331 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	PNP	P00491	289 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	CSF2	P04141	144 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	OR8U8	P0C7N1	319 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	CARTPT	Q16568	116 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	NEK5	Q6P3R8	708 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	HSD11B1L	Q7Z5J1	315 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	CNTN4	Q8IWV2	1026 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	KIR2DL5A	Q8N109	375 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	CNPY4	Q8N129	248 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	FAM71E2	Q8N5Q1	922 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	MDS2	Q8NDY4	140 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	DQX1	Q8TE96	717 aa	Known RBP	1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	ARHGDIG	Q99819	225 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	TBC1D10A	Q9BXI6	508 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	COMMD4	Q9H0A8	199 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	RPAP3	Q9H6T3	665 aa	Predicted RBP	1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	POLD4	Q9HCU8	107 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	TRPV5	Q9NQA5	729 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	NANS	Q9NR45	359 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	NDUFA13	Q9P0J0	144 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	ZNF225	Q9UK10	706 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	APPL1	Q9UKG1	709 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	PSG11	Q9UQ72	335 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	IFT52	Q9Y366	437 aa		1.81	□□□□□ -2.12
UBR1-209	ENST00000569243	THSD7B	Q9C0I4	1608 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243		H0YL77	283 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	CCER2	I3L3R5	266 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	NBR2	O15453	112 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	KIN	O60870	393 aa	Known RBP	1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	INS	P01308	110 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	PDHB	P11177	359 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	HTR5A	P47898	357 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	CSNK1D	P48730	415 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	SUCLG1	P53597	346 aa	Known RBP	1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	RPA4	Q13156	261 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	SNX1	Q13596	522 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	CCDC184	Q52MB2	194 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	CASC10	Q5T4H9	136 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	RNF165	Q6ZSG1	346 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	FAM43B	Q6ZT52	329 aa	Predicted RBP	1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	CCDC91	Q7Z6B0	441 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	SAXO1	Q8IYX7	474 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	ANKRD20A12P	Q8NF67	263 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	EXOC6	Q8TAG9	804 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	ELMO2	Q96JJ3	720 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	MCHR1	Q99705	422 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	SLC30A2	Q9BRI3	323 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	SRXN1	Q9BYN0	137 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	CHIA	Q9BZP6	476 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	NARFL	Q9H6Q4	476 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	KCNN3	Q9UGI6	736 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	CYTH4	Q9UIA0	394 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	DNPEP	Q9ULA0	475 aa		1.8	□□□□□ -2.12
UBR1-209	ENST00000569243	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	1.79	□□□□□ -2.12
UBR1-209	ENST00000569243	FBN1	P35555	2871 aa	Known RBP	1.79	□□□□□ -2.12
UBR1-209	ENST00000569243	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	1.79	□□□□□ -2.12
UBR1-209	ENST00000569243	LOC100131303	A0A0U1RQF7	123 aa		1.79	□□□□□ -2.12
UBR1-209	ENST00000569243	FAM166B	A8MTA8	275 aa		1.79	□□□□□ -2.12
UBR1-209	ENST00000569243	DLGAP1	O14490	977 aa		1.79	□□□□□ -2.12
UBR1-209	ENST00000569243	PRDX3	P30048	256 aa	Known RBP	1.79	□□□□□ -2.12
UBR1-209	ENST00000569243	HPD	P32754	393 aa	Predicted RBP	1.79	□□□□□ -2.12
UBR1-209	ENST00000569243	RPS10	P46783	165 aa	Known RBP	1.79	□□□□□ -2.12
UBR1-209	ENST00000569243	GNPDA1	P46926	289 aa		1.79	□□□□□ -2.12
UBR1-209	ENST00000569243	LIM2	P55344	173 aa		1.79	□□□□□ -2.12

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms