RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 LHFPL5Q8TAF8 219 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 LGALS14Q8TCE9 139 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 CHTF18Q8WVB6 975 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 TSEN15Q8WW01 171 aaKnown RBP10.22□□□□□ -0.77
PALB2-206ENST00000568219 THAP4Q8WY91 577 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 ZDHHC4Q9NPG8 344 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 STRCP1A6NGW2 1772 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 MPC1LP0DKB6 136 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 ZNF35P13682 527 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 ELNP15502 786 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 FUT1P19526 365 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 POU3F2P20265 443 aaPredicted RBP10.22□□□□□ -0.77
PALB2-206ENST00000568219 MAPK9P45984 424 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 TNFRSF17Q02223 184 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 EIF2B5Q13144 721 aaKnown RBP10.22□□□□□ -0.77
PALB2-206ENST00000568219 GGTA1PQ4G0N0 100 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 TRILQ7L0X0 811 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 NDUFAF7Q7L592 441 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 RNF180Q86T96 592 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 KLHDC8BQ8IXV7 354 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 ZSCAN1Q8NBB4 408 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 UBTD2Q8WUN7 234 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 MRPL48Q96GC5 212 aaKnown RBP10.22□□□□□ -0.77
PALB2-206ENST00000568219 ORAI3Q9BRQ5 295 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 ARHGAP9Q9BRR9 750 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 KLHL9Q9P2J3 617 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 KLK11Q9UBX7 282 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 SLC7A7Q9UM01 511 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 NPIPA5A0A0B4J1W7 369 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 NPIPA7E9PJI5 369 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 H0YIV9 168 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 TXNL1O43396 289 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 GCM2O75603 506 aaPredicted RBP10.22□□□□□ -0.77
PALB2-206ENST00000568219 PAK4O96013 591 aaPredicted RBP10.22□□□□□ -0.77
PALB2-206ENST00000568219 NPIPA8P0DM63 369 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 RRASP10301 218 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 HPGDP15428 266 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 CSNK2A2P19784 350 aaPredicted RBP10.22□□□□□ -0.77
PALB2-206ENST00000568219 ITGB7P26010 798 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 GJA5P36382 358 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 AQP2P41181 271 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 KCNJ5P48544 419 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 ARFIP1P53367 373 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 ADAM8P78325 824 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 ZNF322Q6U7Q0 402 aaPredicted RBP10.22□□□□□ -0.77
PALB2-206ENST00000568219 ZNF783Q6ZMS7 281 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 NKAIN4Q8IVV8 208 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 TMEM99Q8N816 258 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 DUSP19Q8WTR2 217 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 C3orf49Q96BT1 292 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 PDCD1LG2Q9BQ51 273 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 TAPBPLQ9BX59 468 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 TMEM168Q9H0V1 697 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 TMEM38AQ9H6F2 299 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 PPP1R3EQ9H7J1 279 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 BRF2Q9HAW0 419 aa10.22□□□□□ -0.77
PALB2-206ENST00000568219 TMEM129A0AVI4 362 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 PRAMEF25A6NGN4 478 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 TO15178 435 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 LATO43561 262 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 DUSP11O75319 330 aaKnown RBP10.21□□□□□ -0.77
PALB2-206ENST00000568219 GLAP06280 429 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 ZNF3P17036 446 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 RBMS1P29558 406 aaKnown RBP10.21□□□□□ -0.77
PALB2-206ENST00000568219 SLC6A1P30531 599 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 BMP8BP34820 402 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 MPIP34949 423 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 AGFG1P52594 562 aaKnown RBP10.21□□□□□ -0.77
PALB2-206ENST00000568219 CCNJQ5T5M9 372 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 GPR139Q6DWJ6 353 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 FAM180AQ6UWF9 173 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 BMP8AQ7Z5Y6 402 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 KRT77Q7Z794 578 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 OAFQ86UD1 273 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 RANBP3LQ86VV4 465 aaPredicted RBP10.21□□□□□ -0.77
PALB2-206ENST00000568219 ZNF687Q8N1G0 1237 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 ZNF615Q8N8J6 731 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 B3GNT4Q9C0J1 378 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 LMAN2LQ9H0V9 348 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 TMEM27Q9HBJ8 222 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 MIA3Q5JRA6 1907 aa10.21□□□□□ -0.77
PALB2-206ENST00000568219 TRAV27A0A087WT01 109 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 LRRC72A6NJI9 287 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 ELOA3DA6NLF2 546 aaPredicted RBP10.21□□□□□ -0.78
PALB2-206ENST00000568219 SOCS5O75159 536 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 RAB3AP20336 220 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 PSMB5P28074 263 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 PNLIPRP1P54315 467 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 FGL1Q08830 312 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 ELOA3BQ3SY89 546 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 CLLU1OSQ5K130 101 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 HEPHL1Q6MZM0 1159 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 SLCO4C1Q6ZQN7 724 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 ZNF467Q7Z7K2 595 aaPredicted RBP10.21□□□□□ -0.78
PALB2-206ENST00000568219 ZNF546Q86UE3 836 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 ZNF683Q8IZ20 524 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 ARMC10Q8N2F6 343 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 ELOA3Q8NG57 546 aa10.21□□□□□ -0.78
PALB2-206ENST00000568219 OR52E2Q8NGJ4 325 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms