RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 PIK3R3Q92569 461 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 DIO2Q92813 273 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 DGCR14Q96DF8 476 aaKnown RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 SLC46A1Q96NT5 459 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 TUBA1CQ9BQE3 449 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 YIPF2Q9BWQ6 316 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 SLC7A5P2Q9GIP4 190 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 QRSL1Q9H0R6 528 aaKnown RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 OR10A5Q9H207 317 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 ADNPQ9H2P0 1102 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 KRCC1Q9NPI7 259 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 NECTIN3Q9NQS3 549 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 RLIMQ9NVW2 624 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 RHCGQ9UBD6 479 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 TESQ9UGI8 421 aaKnown RBP13.52□□□□□ -0.25
COMMD4-221ENST00000567935 RARRES3Q9UL19 164 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 ERVK-19Q9WJR5 959 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 MAU2Q9Y6X3 613 aa13.52□□□□□ -0.25
COMMD4-221ENST00000567935 IGLV3-12A0A075B6K2 115 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 IGHV5-10-1A0A0J9YXX1 117 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 MYOCOSA0A1B0GUC4 107 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 TCRBV16S1A1N1A0A5B0 115 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 ENO4A6NNW6 628 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 C17orf105B2RV13 164 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 ABCB7O75027 752 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 ONECUT2O95948 504 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 GASTP01350 101 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 EEF1B2P24534 225 aaKnown RBP13.51□□□□□ -0.25
COMMD4-221ENST00000567935 SSTR4P31391 388 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 CDC42P60953 191 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 DCAF7P61962 342 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 RHAGQ02094 409 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 ILKQ13418 452 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 ERV3-1Q14264 604 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 NPTX1Q15818 432 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 ZNF141Q15928 474 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 MEP1AQ16819 746 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.51□□□□□ -0.25
COMMD4-221ENST00000567935 CTU2Q2VPK5 515 aaKnown RBP13.51□□□□□ -0.25
COMMD4-221ENST00000567935 NADK2Q4G0N4 442 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 FLYWCH1Q4VC44 716 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 C1orf94Q6P1W5 598 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 PGBD2Q6P3X8 592 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 PODNL1Q6PEZ8 512 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 PLEKHM3Q6ZWE6 761 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 OLIG3Q7RTU3 272 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 SATL1Q86VE3 508 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 ZNF615Q8N8J6 731 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 OR4K5Q8NGD3 323 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 C16orf52Q8NHV5 167 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 IPCEF1Q8WWN9 437 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-221ENST00000567935 DAZLQ92904 295 aaKnown RBP13.51□□□□□ -0.25
COMMD4-221ENST00000567935 ZG16BQ96DA0 208 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 GFM1Q96RP9 751 aaKnown RBP13.51□□□□□ -0.25
COMMD4-221ENST00000567935 MCHR1Q99705 422 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 NIPSNAP1Q9BPW8 284 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 HOXD1Q9GZZ0 328 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-221ENST00000567935 MAN2C1Q9NTJ4 1040 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 DHCR7Q9UBM7 475 aaKnown RBP13.51□□□□□ -0.25
COMMD4-221ENST00000567935 MRTO4Q9UKD2 239 aaKnown RBP13.51□□□□□ -0.25
COMMD4-221ENST00000567935 CHST2Q9Y4C5 530 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 PCDHGA6Q9Y5G7 932 aa13.51□□□□□ -0.25
COMMD4-221ENST00000567935 GXYLT2A0PJZ3 443 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 CDHR4A6H8M9 788 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 ZAR1LA6NP61 321 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 K7ENP7 123 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 POLR1CO15160 346 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-221ENST00000567935 GP1BAP07359 652 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 JUNBP17275 347 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-221ENST00000567935 PGDP52209 483 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 CRISP1P54107 249 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 CDH15P55291 814 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 INSM1Q01101 510 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-221ENST00000567935 SEC23BQ15437 767 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 DECR1Q16698 335 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 MINDY4Q4G0A6 757 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 CCNJQ5T5M9 372 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 INO80CQ6PI98 192 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-221ENST00000567935 KLHL17Q6TDP4 642 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 ISLR2Q6UXK2 745 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 RRM2BQ7LG56 351 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 SLITRK4Q8IW52 837 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 TMEM151BQ8IW70 566 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 SHISA5Q8N114 240 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 CLIP4Q8N3C7 705 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 MORN4Q8NDC4 146 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 GNPDA2Q8TDQ7 276 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 ACOT11Q8WXI4 607 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-221ENST00000567935 GTPBP3Q969Y2 492 aaKnown RBP13.5□□□□□ -0.25
COMMD4-221ENST00000567935 SENP5Q96HI0 755 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-221ENST00000567935 CCDC74BQ96LY2 380 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 ZNF559Q9BR84 538 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 PLCXD1Q9NUJ7 323 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 IMPAD1Q9NX62 359 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 SIDT1Q9NXL6 827 aaKnown RBP13.5□□□□□ -0.25
COMMD4-221ENST00000567935 ATXN7L1Q9ULK2 861 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-221ENST00000567935 SNX5Q9Y5X3 404 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 CLCA3PQ9Y6N3 262 aa13.5□□□□□ -0.25
COMMD4-221ENST00000567935 TRAPPC13A5PLN9 417 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms