RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	CTAG2	O75638	210 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	C6orf47	O95873	294 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	TGM6	O95932	706 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	CRH	P06850	196 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	KRT16	P08779	473 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	EPX	P11678	715 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	ATP6V1C1	P21283	382 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	BGN	P21810	368 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZNF41	P51814	821 aa	Predicted RBP	6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	SUCLG1	P53597	346 aa	Known RBP	6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	CLDN15	P56746	228 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	TP53BP2	Q13625	1128 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	LASP1	Q14847	261 aa	Known RBP	6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	DAZAP2	Q15038	168 aa	Predicted RBP	6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	PDCD2	Q16342	344 aa	Predicted RBP	6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	TMEM44	Q2T9K0	475 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	FLYWCH1	Q4VC44	716 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	CCNJ	Q5T5M9	372 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	DMRTA1	Q5VZB9	504 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	OR2A2	Q6IF42	318 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	CDC73	Q6P1J9	531 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	BHLHB9	Q6PI77	547 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	P4HA3	Q7Z4N8	544 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	CAMKMT	Q7Z624	323 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZAR1	Q86SH2	424 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	CDH24	Q86UP0	819 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	TMEM200A	Q86VY9	491 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	MISP	Q8IVT2	679 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	GCNT2	Q8N0V5	402 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZNF781	Q8N8C0	355 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	GATS	Q8NAP1	163 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZNF527	Q8NB42	609 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	OR5M1	Q8NGP8	315 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	SFXN5	Q8TD22	340 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	ACTRT2	Q8TDY3	377 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	ADAMTS15	Q8TE58	950 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	CDS1	Q92903	461 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	MOAP1	Q96BY2	351 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZBTB9	Q96C00	473 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	OTUB1	Q96FW1	271 aa	Predicted RBP	6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	SORT1	Q99523	831 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	RBM24	Q9BX46	236 aa	Known RBP	6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	POLDIP3	Q9BY77	421 aa	Known RBP	6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	HOXD1	Q9GZZ0	328 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	CXorf36	Q9H7Y0	433 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	TMBIM4	Q9HC24	238 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	GPATCH2	Q9NW75	528 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	DNAJB12	Q9NXW2	375 aa	Known RBP	6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	HAO1	Q9UJM8	370 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	PCDHGB4	Q9UN71	923 aa		6.24	□□□□□ -1.41
SF3B3-209	ENST00000567635	CAD	P27708	2225 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	OTOG	Q6ZRI0	2925 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	ACAN	P16112	2415 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	PRSS51	A0A1B0GVH4	220 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635		A0A1W2PNV4	684 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635		A0A1W2PQD3	144 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	FAM221A	A4D161	298 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	DUXA	A6NLW8	204 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635		A6NNC1	897 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635		A8MXE2	369 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635		H0YC42	278 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635		H3BML4	177 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635		H3BNH8	94 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	GTPBP1	O00178	669 aa	Known RBP	6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	RNASET2	O00584	256 aa	Known RBP	6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	TNFSF13	O75888	250 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	LBP	P18428	481 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	MATN1	P21941	496 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	ATP12A	P54707	1039 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	TPD52	P55327	224 aa	Predicted RBP	6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	CLDN20	P56880	219 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	RPS3A	P61247	264 aa	Known RBP	6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	HBA1	P69905	142 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	SORD	Q00796	357 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	OCRL	Q01968	901 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	SGCB	Q16585	318 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	KLHL26	Q53HC5	615 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	DCST2	Q5T1A1	773 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	AGBL2	Q5U5Z8	902 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	OR4F3	Q6IEY1	312 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	C6orf120	Q7Z4R8	191 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	LUZP2	Q86TE4	346 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	WDR75	Q8IWA0	830 aa	Known RBP	6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	LRRC34	Q8IZ02	419 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	CNEP1R1	Q8N9A8	125 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	ANKRD42	Q8N9B4	389 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	VPS37A	Q8NEZ2	397 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	OR8J2	Q8NGG1	315 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	OR5AK3P	Q8NH89	298 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	B4GALNT2	Q8NHY0	566 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	PHOSPHO1	Q8TCT1	267 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	FIG4	Q92562	907 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	ARL8A	Q96BM9	186 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	ZBTB8A	Q96BR9	441 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	STARD4	Q96DR4	205 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	OR7D2	Q96RA2	312 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	SDF2	Q99470	211 aa		6.23	□□□□□ -1.41
SF3B3-209	ENST00000567635	TACO1	Q9BSH4	297 aa	Known RBP	6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms