RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 SGCBQ16585 318 aa16.91■□□□□ 0.3
IFT140-208ENST00000566818 TMEM44Q2T9K0 475 aa16.91■□□□□ 0.3
IFT140-208ENST00000566818 DCST2Q5T1A1 773 aa16.91■□□□□ 0.3
IFT140-208ENST00000566818 MTERF4Q7Z6M4 381 aaKnown RBP16.91■□□□□ 0.3
IFT140-208ENST00000566818 WDR75Q8IWA0 830 aaKnown RBP16.91■□□□□ 0.3
IFT140-208ENST00000566818 GTPBP8Q8N3Z3 284 aaPredicted RBP16.91■□□□□ 0.3
IFT140-208ENST00000566818 B4GALNT2Q8NHY0 566 aa16.91■□□□□ 0.3
IFT140-208ENST00000566818 FIG4Q92562 907 aa16.91■□□□□ 0.3
IFT140-208ENST00000566818 NINJ1Q92982 152 aa16.91■□□□□ 0.3
IFT140-208ENST00000566818 SH3YL1Q96HL8 342 aaPredicted RBP16.91■□□□□ 0.3
IFT140-208ENST00000566818 AKTIPQ9H8T0 292 aa16.91■□□□□ 0.3
IFT140-208ENST00000566818 PAQR5Q9NXK6 330 aaPredicted RBP16.91■□□□□ 0.3
IFT140-208ENST00000566818 FAM221AA4D161 298 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 SHISA8B8ZZ34 492 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 H0YC42 278 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 SMNDC1O75940 238 aaKnown RBP eCLIP16.9■□□□□ 0.3
IFT140-208ENST00000566818 CD1EP15812 388 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 BGNP21810 368 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 ME2P23368 584 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 SUCLG1P53597 346 aaKnown RBP16.9■□□□□ 0.3
IFT140-208ENST00000566818 TPD52P55327 224 aaPredicted RBP16.9■□□□□ 0.3
IFT140-208ENST00000566818 CLDN15P56746 228 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 CLDN20P56880 219 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 STX3Q13277 289 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 PON3Q15166 354 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 TESK1Q15569 626 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 PLPPR5Q32ZL2 321 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 TNFAIP8L3Q5GJ75 292 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 HHATQ5VTY9 493 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 LRRC34Q8IZ02 419 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 OR5AK3PQ8NH89 298 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 LINC01560Q8TB33 94 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 PAIP2Q9BPZ3 127 aaKnown RBP16.9■□□□□ 0.3
IFT140-208ENST00000566818 DPY30Q9C005 99 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 ZNF395Q9H8N7 513 aaPredicted RBP16.9■□□□□ 0.3
IFT140-208ENST00000566818 MED17Q9NVC6 651 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 GPATCH2Q9NW75 528 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 FBXO34Q9NWN3 711 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 HAO1Q9UJM8 370 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 PCDHGB4Q9UN71 923 aa16.9■□□□□ 0.3
IFT140-208ENST00000566818 UQCRHLA0A096LP55 91 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 A8MXE2 369 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 RNASET2O00584 256 aaKnown RBP16.89■□□□□ 0.29
IFT140-208ENST00000566818 EIF1AYO14602 144 aaKnown RBP16.89■□□□□ 0.29
IFT140-208ENST00000566818 HBA1P69905 142 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 SIRPAP78324 504 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 PPP4R4Q6NUP7 873 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 SPNS3Q6ZMD2 512 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 MED12LQ86YW9 2145 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 VPS37AQ8NEZ2 397 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 FNDC9Q8TBE3 224 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 PHOSPHO1Q8TCT1 267 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 ZNF845Q96IR2 970 aaPredicted RBP16.89■□□□□ 0.29
IFT140-208ENST00000566818 DACH2Q96NX9 599 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 SORT1Q99523 831 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 PRRG4Q9BZD6 226 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 RNF122Q9H9V4 155 aa16.89■□□□□ 0.29
IFT140-208ENST00000566818 RNF103-CHMP3A0A140T963 221 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 SH3D21A4FU49 640 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 DUXAA6NLW8 204 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 ERLIN1O75477 346 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 AK1P00568 194 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 LBPP18428 481 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 EIF1P41567 113 aaKnown RBP16.88■□□□□ 0.29
IFT140-208ENST00000566818 EIF1AXP47813 144 aaKnown RBP16.88■□□□□ 0.29
IFT140-208ENST00000566818 ART1P52961 327 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 CLNS1AP54105 237 aaKnown RBP16.88■□□□□ 0.29
IFT140-208ENST00000566818 SUMO3P55854 103 aaPredicted RBP16.88■□□□□ 0.29
IFT140-208ENST00000566818 CD226Q15762 336 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 DPY19L1Q2PZI1 675 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 PDSS1Q5T2R2 415 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 OR4F3Q6IEY1 312 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 VWA1Q6PCB0 445 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 GGNQ86UU5 652 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 CDC20BQ86Y33 519 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 ANKRD42Q8N9B4 389 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 OR4A15Q8NGL6 344 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 NUDT8Q8WV74 236 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 NRGNQ92686 78 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 STARD4Q96DR4 205 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 SLC35G5Q96KT7 338 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 RNF145Q96MT1 663 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 OR7D2Q96RA2 312 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 NUF2Q9BZD4 464 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 NDRG3Q9UGV2 375 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 ST6GALNAC2Q9UJ37 374 aa16.88■□□□□ 0.29
IFT140-208ENST00000566818 MCTS1Q9ULC4 181 aaKnown RBP16.88■□□□□ 0.29
IFT140-208ENST00000566818 SPG11Q96JI7 2443 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 SYNGR4O95473 234 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 NUDT14O95848 222 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 DNASE1P24855 282 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 ELK4P28324 431 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 PCYT1AP49585 367 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 ATP12AP54707 1039 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 RAC1P63000 192 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 ZNF117Q03924 483 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 MPP2Q14168 576 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 ANXA8L1Q5VT79 327 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 CLECL1Q8IZS7 167 aa16.87■□□□□ 0.29
IFT140-208ENST00000566818 ZNF614Q8N883 585 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms