RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 PCGF5Q86SE9 256 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 FAM228AQ86W67 206 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 C17orf64Q86WR6 236 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 CCDC83Q8IWF9 413 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 GPR65Q8IYL9 337 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 RNF182Q8N6D2 247 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 DCAF4L2Q8NA75 395 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 CHDHQ8NE62 594 aaPredicted RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 BBS1Q8NFJ9 593 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 VN1R2Q8NFZ6 395 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 OR4F5Q8NH21 305 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 GOLGA5Q8TBA6 731 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 FBXO25Q8TCJ0 367 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 MRPL24Q96A35 216 aaKnown RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 RPGRIP1Q96KN7 1286 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 TGS1Q96RS0 853 aaKnown RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 NRTNQ99748 197 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 SPZ1Q9BXG8 430 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 SLC17A9Q9BYT1 436 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 CWH43Q9H720 699 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 MINDY3Q9H8M7 445 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 ZNF302Q9NR11 478 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 NSMCE4AQ9NXX6 385 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 NRBP1Q9UHY1 535 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 BARX2Q9UMQ3 279 aaPredicted RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 PPIAL4AQ9Y536 164 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 ZFHX2Q9C0A1 2572 aaPredicted RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 KNL1Q8NG31 2342 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 ZZEF1O43149 2961 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 MYOFQ9NZM1 2061 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 FRMPD3Q5JV73 1810 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 ASXL3Q9C0F0 2248 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 FCGBPQ9Y6R7 5405 aaPredicted RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 MICAL3Q7RTP6 2002 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 TECTAO75443 2155 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 LAMB1P07942 1786 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 PLIN4Q96Q06 1357 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 MYO18AQ92614 2054 aaKnown RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 DOCK9Q9BZ29 2069 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 LTBP2Q14767 1821 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 MYH11P35749 1972 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 ARHGAP21Q5T5U3 1957 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 FAM170AA1A519 330 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 MBLAC1A4D2B0 266 aaPredicted RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 ARL5CA6NH57 179 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 TMEM110-MUSTN1A8MSY1 372 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 E9PMD0 336 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 M0R296 226 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 WWP2O00308 870 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 DLGAP1O14490 977 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 CPLX1O14810 134 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 FIBPO43427 364 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 HCRTO43612 131 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 PFKFB2O60825 505 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 FCGR3BO75015 233 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 N4BP1O75113 896 aaKnown RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 MED6O75586 246 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 H2AFZP0C0S5 128 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 OR4Q2P0C623 313 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 CYP11B1P15538 503 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 IFNAR1P17181 557 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 BDNFP23560 247 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 PTPN4P29074 926 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 CASP1P29466 404 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 MARCKSP29966 332 aaPredicted RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 CDH5P33151 784 aaPredicted RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 ACTN2P35609 894 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 SLC11A1P49279 550 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 VCPP55072 806 aaKnown RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 ARPP19P56211 112 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 OSTNP61366 133 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 AKAP17AQ02040 695 aaKnown RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 PAX5Q02548 391 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 LAMTOR4Q0VGL1 99 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 MS4A13Q5J8X5 152 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 GLRA4Q5JXX5 417 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 CAPN13Q6MZZ7 669 aaPredicted RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 RPUSD3Q6P087 351 aaKnown RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 MIER3Q7Z3K6 550 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 TMEM110Q86TL2 294 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 ECHDC2Q86YB7 292 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 THNSL1Q8IYQ7 743 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 SAXO1Q8IYX7 474 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 BLIDQ8IZY5 108 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 MRPL43Q8N983 215 aaKnown RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 STKLD1Q8NE28 680 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 PHOSPHO2Q8TCD6 241 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 SAP25Q8TEE9 199 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 PNPLA2Q96AD5 504 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 C18orf25Q96B23 403 aaPredicted RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 EPSTI1Q96J88 318 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 CEP170P1Q96L14 293 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 FOPNLQ96NB1 174 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 ZMAT2Q96NC0 199 aaKnown RBP1.11□□□□□ -2.23
SMG1-212ENST00000566328 MTMR9Q96QG7 549 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 LZTS2Q9BRK4 669 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 ZNF670Q9BS34 389 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 NICN1Q9BSH3 213 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 DPH7Q9BTV6 452 aa1.11□□□□□ -2.23
SMG1-212ENST00000566328 PLA2G2FQ9BZM2 168 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms