RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CDS1Q92903 461 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 SH3YL1Q96HL8 342 aaPredicted RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 RNF145Q96MT1 663 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 STACQ99469 402 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 BTBD2Q9BX70 525 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 ROPN1BQ9BZX4 212 aaPredicted RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 ROPN1Q9HAT0 212 aaPredicted RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 DLL4Q9NR61 685 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 MED17Q9NVC6 651 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 ELOVL5Q9NYP7 299 aa16.44■□□□□ 0.22
USB1-213ENST00000566292 C6orf203Q9P0P8 240 aaPredicted RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 EIF3LQ9Y262 564 aaKnown RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 RAI1Q7Z5J4 1906 aaPredicted RBP16.44■□□□□ 0.22
USB1-213ENST00000566292 NIPBLQ6KC79 2804 aaeCLIP16.43■□□□□ 0.22
USB1-213ENST00000566292 A0A1W2PQD3 144 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 C7orf72A4D263 438 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 OPN1LWP04000 364 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 SERPINB5P36952 375 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 RPL3P39023 403 aaKnown RBP16.43■□□□□ 0.22
USB1-213ENST00000566292 SERPINB4P48594 390 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 IL23RQ5VWK5 629 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 C22orf34Q6ZV56 151 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 FAM214BQ7L5A3 538 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 ZNF550Q7Z398 422 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 MISPQ8IVT2 679 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 WDR75Q8IWA0 830 aaKnown RBP16.43■□□□□ 0.22
USB1-213ENST00000566292 KRTCAP2Q8N6L1 136 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 OR10D3Q8NH80 312 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 PSMA8Q8TAA3 256 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 ACTRT2Q8TDY3 377 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 OR5P2Q8WZ92 322 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 ZBTB8AQ96BR9 441 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 PIGUQ9H490 435 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 CXorf36Q9H7Y0 433 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 HHATLQ9HCP6 504 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 DUSP22Q9NRW4 184 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 CLEC4AQ9UMR7 237 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 PROCRQ9UNN8 238 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 SNX8Q9Y5X2 465 aa16.43■□□□□ 0.22
USB1-213ENST00000566292 NPIPA5A0A0B4J1W7 369 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 NPIPA7E9PJI5 369 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 SCDO00767 359 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 TYROBPO43914 113 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 C6orf47O95873 294 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 BPGMP07738 259 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 NPIPA8P0DM63 369 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 FCGR2AP12318 317 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 HPGDP15428 266 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 DDX5P17844 614 aaKnown RBP16.42■□□□□ 0.22
USB1-213ENST00000566292 CRYGSP22914 178 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 ETV4P43268 484 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 CCT3P49368 545 aaKnown RBP16.42■□□□□ 0.22
USB1-213ENST00000566292 RAC1P63000 192 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 FGFBP1Q14512 234 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 CPTPQ5TA50 214 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 PPP4R4Q6NUP7 873 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 CDC73Q6P1J9 531 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 RIMKLAQ8IXN7 391 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 FNDC5Q8NAU1 212 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 WFDC11Q8NEX6 87 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 COQ8BQ96D53 544 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 CHMP6Q96FZ7 201 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 SLC39A3Q9BRY0 314 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 MED18Q9BUE0 208 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 TMEM185BQ9H7F4 350 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 GPATCH2Q9NW75 528 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 GIN1Q9NXP7 522 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 STOML1Q9UBI4 398 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 KCNE3Q9Y6H6 103 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 PRR14LQ5THK1 2151 aa16.42■□□□□ 0.22
USB1-213ENST00000566292 A0A0J9YW62 118 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 C16orf97H3BN30 126 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 TNFSF11O14788 317 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 ADAMDEC1O15204 470 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 OIP5O43482 229 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 CXCL13O43927 109 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 LYPLA1O75608 230 aaPredicted RBP16.41■□□□□ 0.22
USB1-213ENST00000566292 HSPA4LO95757 839 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 LINGO3P0C6S8 592 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 IL11P20809 199 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 HOXC12P31275 282 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 KCNJ5P48544 419 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 RNF144AP50876 292 aaPredicted RBP16.41■□□□□ 0.22
USB1-213ENST00000566292 ZNF41P51814 821 aaPredicted RBP16.41■□□□□ 0.22
USB1-213ENST00000566292 ZNF117Q03924 483 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 TP53BP2Q13625 1128 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 CXorf67Q86X51 503 aaPredicted RBP16.41■□□□□ 0.22
USB1-213ENST00000566292 KRTAP1-3Q8IUG1 177 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 OR2V1Q8NHB1 315 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 B4GALNT2Q8NHY0 566 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 MARK4Q96L34 752 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 ACTRT3Q9BYD9 372 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 PRRG4Q9BZD6 226 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 PLSCR4Q9NRQ2 329 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 ZNF226Q9NYT6 803 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 ARID1AO14497 2285 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 DSCAMO60469 2012 aa16.41■□□□□ 0.22
USB1-213ENST00000566292 SS18L1O75177 396 aaPredicted RBP16.4■□□□□ 0.22
USB1-213ENST00000566292 DCST2Q5T1A1 773 aa16.4■□□□□ 0.22
USB1-213ENST00000566292 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms