RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 MTORP42345 2549 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 CENPVL1A0A0U1RR11 272 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 SH3D21A4FU49 640 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 TMEM114B3SHH9 223 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 MSTNO14793 375 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 SCN2BO60939 215 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 LINGO3P0C6S8 592 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 PEX19P40855 299 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 CCT3P49368 545 aaKnown RBP13.2□□□□□ -0.3
USB1-210ENST00000565151 CLK3P49761 638 aaKnown RBP13.2□□□□□ -0.3
USB1-210ENST00000565151 C21orf58P58505 322 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 RPS26P62854 115 aaKnown RBP13.2□□□□□ -0.3
USB1-210ENST00000565151 SIRPAP78324 504 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 EMX2Q04743 252 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 PDCD2Q16342 344 aaPredicted RBP13.2□□□□□ -0.3
USB1-210ENST00000565151 VPS26BQ4G0F5 336 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 KLHL26Q53HC5 615 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 P4HA3Q7Z4N8 544 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 GTPBP8Q8N3Z3 284 aaPredicted RBP13.2□□□□□ -0.3
USB1-210ENST00000565151 MEIOBQ8N635 442 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 COX18Q8N8Q8 333 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 CNEP1R1Q8N9A8 125 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 ZNF610Q8N9Z0 462 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 OR5D16Q8NGK9 328 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 OR5AK3PQ8NH89 298 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 GOT1L1Q8NHS2 421 aaPredicted RBP13.2□□□□□ -0.3
USB1-210ENST00000565151 JADE3Q92613 823 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 ARSGQ96EG1 525 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 PGM2Q96G03 612 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 RNF145Q96MT1 663 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 WFIKKN1Q96NZ8 548 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 ZIM3Q96PE6 472 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 STACQ99469 402 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 FOXC2Q99958 501 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 PIGQQ9BRB3 760 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 PIGMQ9H3S5 423 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 UBQLN4Q9NRR5 601 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 DUSP22Q9NRW4 184 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 KCNE5Q9UJ90 142 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 TESMINQ9Y4I5 508 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 SNX8Q9Y5X2 465 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 AP4B1Q9Y6B7 739 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 ROS1P08922 2347 aa13.2□□□□□ -0.3
USB1-210ENST00000565151 NF1P21359 2839 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 FLNAP21333 2647 aaKnown RBP13.19□□□□□ -0.3
USB1-210ENST00000565151 A0A0J9YW62 118 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 A0A1W2PQD3 144 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 C7orf72A4D263 438 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 ANKRD28O15084 1053 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 CTIFO43310 598 aaKnown RBP13.19□□□□□ -0.3
USB1-210ENST00000565151 SMNDC1O75940 238 aaKnown RBP eCLIP13.19□□□□□ -0.3
USB1-210ENST00000565151 ATE1O95260 518 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 CRHP06850 196 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 BGNP21810 368 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 LOXP28300 417 aaPredicted RBP13.19□□□□□ -0.3
USB1-210ENST00000565151 CPA2P48052 419 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 CLDN8P56748 225 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 ABCE1P61221 599 aaKnown RBP13.19□□□□□ -0.3
USB1-210ENST00000565151 POU6F2P78424 691 aaPredicted RBP13.19□□□□□ -0.3
USB1-210ENST00000565151 ZNF117Q03924 483 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 TP53BP2Q13625 1128 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 TOMM34Q15785 309 aaPredicted RBP13.19□□□□□ -0.3
USB1-210ENST00000565151 OR4F3Q6IEY1 312 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 PAMR1Q6UXH9 720 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 CAMKMTQ7Z624 323 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 NINJ1Q92982 152 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 LRRC46Q96FV0 321 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 MARK4Q96L34 752 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 DACH2Q96NX9 599 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 OR7D2Q96RA2 312 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 DUSP26Q9BV47 211 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 TMUB1Q9BVT8 246 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 ACTRT3Q9BYD9 372 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 TMEM185BQ9H7F4 350 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 PNPOQ9NVS9 261 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 ASIC5Q9NY37 505 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 ICAM5Q9UMF0 924 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 CLEC4AQ9UMR7 237 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 ZNF175Q9Y473 711 aa13.19□□□□□ -0.3
USB1-210ENST00000565151 DEFB108AA8MXU0 73 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 ESPNB1AK53 854 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 LINC01387J3KSC0 135 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 EIF1AYO14602 144 aaKnown RBP13.18□□□□□ -0.3
USB1-210ENST00000565151 ADAMDEC1O15204 470 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 RGS16O15492 202 aaPredicted RBP13.18□□□□□ -0.3
USB1-210ENST00000565151 CXCL13O43927 109 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 SERPINE1P05121 402 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 ZNF17P17021 662 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 PRPS1L1P21108 318 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 MAPK1P28482 360 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 CPOXP36551 454 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 CASP9P55211 416 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 WDR4P57081 412 aaKnown RBP13.18□□□□□ -0.3
USB1-210ENST00000565151 DCST2Q5T1A1 773 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 KRTAP1-3Q8IUG1 177 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 OR10D3Q8NH80 312 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 ACTRT2Q8TDY3 377 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 TEX37Q96LM6 180 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 SDF2Q99470 211 aa13.18□□□□□ -0.3
USB1-210ENST00000565151 BHLHE41Q9C0J9 482 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms