RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 PRICKLE4Q2TBC4 344 aa16.46■□□□□ 0.23
GDE1-203ENST00000564172 CRB2Q5IJ48 1285 aa16.46■□□□□ 0.23
GDE1-203ENST00000564172 YOD1Q5VVQ6 348 aaPredicted RBP16.46■□□□□ 0.23
GDE1-203ENST00000564172 CDH24Q86UP0 819 aa16.46■□□□□ 0.23
GDE1-203ENST00000564172 EPHX4Q8IUS5 362 aa16.46■□□□□ 0.23
GDE1-203ENST00000564172 SLC44A2Q8IWA5 706 aaPredicted RBP16.46■□□□□ 0.23
GDE1-203ENST00000564172 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.46■□□□□ 0.23
GDE1-203ENST00000564172 CENPNQ96H22 339 aaPredicted RBP16.46■□□□□ 0.23
GDE1-203ENST00000564172 TMEM19Q96HH6 336 aa16.46■□□□□ 0.23
GDE1-203ENST00000564172 RBM14Q96PK6 669 aaKnown RBP16.46■□□□□ 0.23
GDE1-203ENST00000564172 EQTNQ9NQ60 294 aa16.46■□□□□ 0.23
GDE1-203ENST00000564172 ANGPT4Q9Y264 503 aa16.46■□□□□ 0.23
GDE1-203ENST00000564172 CLDN16Q9Y5I7 305 aa16.46■□□□□ 0.23
GDE1-203ENST00000564172 WDR87Q6ZQQ6 2873 aa16.46■□□□□ 0.23
GDE1-203ENST00000564172 AGAP5A6NIR3 686 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 TMEM229AB2RXF0 380 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 D6RAR5 112 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 CDX4O14627 284 aaPredicted RBP16.45■□□□□ 0.22
GDE1-203ENST00000564172 DSCR3O14972 297 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 ZNF806P0C7X5 589 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 CRHBPP24387 322 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 KHKP50053 298 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 ARHGDIAP52565 204 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 MGAT2Q10469 447 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 VTCN1Q7Z7D3 282 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 DOK4Q8TEW6 326 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 OTUB1Q96FW1 271 aaPredicted RBP16.45■□□□□ 0.22
GDE1-203ENST00000564172 DMRTB1Q96MA1 342 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 OR6C1Q96RD1 312 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 A0A087WV62 115 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 OR2W5A6NFC9 320 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 HYAL3O43820 417 aaPredicted RBP16.45■□□□□ 0.22
GDE1-203ENST00000564172 NME6O75414 186 aaPredicted RBP16.45■□□□□ 0.22
GDE1-203ENST00000564172 LDLRP01130 860 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 ATXN8OSP0DMR3 200 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 HOXB6P17509 224 aaKnown RBP16.45■□□□□ 0.22
GDE1-203ENST00000564172 ACP1P24666 158 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 ANXA11P50995 505 aaKnown RBP16.45■□□□□ 0.22
GDE1-203ENST00000564172 TEKQ02763 1124 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 PRKCDQ05655 676 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 STX4Q12846 297 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 FAPQ12884 760 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 FAM209BQ5JX69 171 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 PHF19Q5T6S3 580 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 FHL5Q5TD97 284 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 SUMF1Q8NBK3 374 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 ZNF675Q8TD23 568 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 CTHRC1Q96CG8 243 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 HSH2DQ96JZ2 352 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 NIPAL2Q9H841 368 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 P2RX2Q9UBL9 471 aa16.45■□□□□ 0.22
GDE1-203ENST00000564172 C19orf53Q9UNZ5 99 aaPredicted RBP16.45■□□□□ 0.22
GDE1-203ENST00000564172 ASCC3Q8N3C0 2202 aaKnown RBP16.44■□□□□ 0.22
GDE1-203ENST00000564172 A0A1B0GX78 115 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 C5orf58C9J3I9 102 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 SUV39H1O43463 412 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 OR10H2O60403 315 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 PLOD3O60568 738 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 CPNE3O75131 537 aaKnown RBP16.44■□□□□ 0.22
GDE1-203ENST00000564172 OPN1SWP03999 348 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 GP1BAP07359 652 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 CT62P0C5K7 136 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 YAP1P46937 504 aaKnown RBP16.44■□□□□ 0.22
GDE1-203ENST00000564172 MAN2A2P49641 1150 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 HSD17B7P56937 341 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 SELENOWP63302 87 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 IGLV3-21P80748 117 aaPredicted RBP16.44■□□□□ 0.22
GDE1-203ENST00000564172 DBPQ10586 325 aaPredicted RBP16.44■□□□□ 0.22
GDE1-203ENST00000564172 DSG2Q14126 1118 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 ELOAQ14241 798 aaKnown RBP16.44■□□□□ 0.22
GDE1-203ENST00000564172 SYPL1Q16563 259 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 TIGD3Q6B0B8 471 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 OFCC1Q8IZS5 231 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 TCTE3Q8IZS6 198 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 TPD52L3Q96J77 140 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 MS4A4EQ96PG1 132 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 PHOX2BQ99453 314 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 ACTRT3Q9BYD9 372 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 ALOXE3Q9BYJ1 711 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 SLC6A15Q9H2J7 730 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 MCCC2Q9HCC0 563 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 IFT46Q9NQC8 304 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 PCDHGB1Q9Y5G3 927 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 ADAMTS20P59510 1910 aa16.44■□□□□ 0.22
GDE1-203ENST00000564172 OR6C65A6NJZ3 312 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 SNAP29O95721 258 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 SEMG1P04279 462 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 MAGEA2P43356 314 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 HOXA1P49639 335 aaPredicted RBP16.43■□□□□ 0.22
GDE1-203ENST00000564172 RPS26P11Q5JNZ5 115 aaPredicted RBP16.43■□□□□ 0.22
GDE1-203ENST00000564172 MFSD12Q6NUT3 480 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 DGAT2L6Q6ZPD8 337 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 MED25Q71SY5 747 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 LGI4Q8N135 537 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 OR8K3Q8NH51 312 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 SETD6Q8TBK2 473 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 DEDD2Q8WXF8 326 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 RBM18Q96H35 190 aaKnown RBP16.43■□□□□ 0.22
GDE1-203ENST00000564172 OR7D2Q96RA2 312 aa16.43■□□□□ 0.22
GDE1-203ENST00000564172 DOHHQ9BU89 302 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms