RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ETNK2Q9NVF9 386 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 ATAD3AQ9NVI7 634 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 FBXL12Q9NXK8 326 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 LHX3Q9UBR4 397 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 IL36AQ9UHA7 158 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 HPCAL4Q9UM19 191 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 PADI2Q9Y2J8 665 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 MFHAS1Q9Y4C4 1052 aa4.26□□□□□ -1.73
LINC00254-201ENST00000563416 WDFY3Q8IZQ1 3526 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 ASXL3Q9C0F0 2248 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 TSPAN11A1L157 253 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 ARHGAP42A6NI28 874 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CYSRT1A8MQ03 144 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CACNB4O00305 520 aaPredicted RBP4.25□□□□□ -1.73
LINC00254-201ENST00000563416 RASGRF2O14827 1237 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 KLF11O14901 512 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 LATO43561 262 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 PSTPIP1O43586 416 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 MFSD11O43934 449 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 OR10H2O60403 315 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 ACSL3O95573 720 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 IL1BP01584 269 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CA4P22748 312 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 KDELR1P24390 212 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 SERPINB6P35237 376 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 HSD17B3P37058 310 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 SLC1A1P43005 524 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 ASMTP46597 345 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CSNK1DP48730 415 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CDH6P55285 790 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 SLC26A5P58743 744 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 IRX1P78414 480 aaPredicted RBP4.25□□□□□ -1.73
LINC00254-201ENST00000563416 DMPKQ09013 629 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CNTN1Q12860 1018 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 TMEM187Q14656 261 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 RFTN1Q14699 578 aaPredicted RBP4.25□□□□□ -1.73
LINC00254-201ENST00000563416 P2RY6Q15077 328 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 SF3A2Q15428 464 aaKnown RBP4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CYTH1Q15438 398 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 SPA17Q15506 151 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 TRADDQ15628 312 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 MAPK11Q15759 364 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 WSCD2Q2TBF2 565 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 ANKDD1AQ495B1 522 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 LBHQ53QV2 105 aaPredicted RBP4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CARD16Q5EG05 197 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 PIP5KL1Q5T9C9 394 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 NCBP2-AS2Q69YL0 99 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 PIGWQ7Z7B1 504 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 TRIM69Q86WT6 500 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 LRRC49Q8IUZ0 686 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 PQLC3Q8N755 202 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 TMEM178AQ8NBL3 297 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 OR13J1Q8NGT2 312 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 OR2T34Q8NGX1 318 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 BIRC7Q96CA5 298 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CFAP36Q96G28 342 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CELF6Q96J87 481 aaKnown RBP4.25□□□□□ -1.73
LINC00254-201ENST00000563416 GDAP1L1Q96MZ0 367 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF599Q96NL3 588 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 PSKH2Q96QS6 385 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 PKP2Q99959 881 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 OMDQ99983 421 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 TM6SF2Q9BZW4 377 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 NEUROG2Q9H2A3 272 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CDH20Q9HBT6 801 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 A4GALTQ9NPC4 353 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 MYNNQ9NPC7 610 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 FGF21Q9NSA1 209 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 SPHK1Q9NYA1 384 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 TRIM10Q9UDY6 481 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 CACNG5Q9UF02 275 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 GPR132Q9UNW8 380 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 TFR2Q9UP52 801 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 NCKAP1Q9Y2A7 1128 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.25□□□□□ -1.73
LINC00254-201ENST00000563416 AKAP13Q12802 2813 aa4.25□□□□□ -1.73
LINC00254-201ENST00000563416 UNC13CQ8NB66 2214 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 A0A0A6YYC8 382 aaPredicted RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 TMEM110-MUSTN1A8MSY1 372 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 MEI4A8MW99 385 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 I3L1I5 382 aaPredicted RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 K7EPI3 171 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 KPNA3O00505 521 aaPredicted RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 CDX4O14627 284 aaPredicted RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 FLRT2O43155 660 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 BUB1O43683 1085 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 CDC123O75794 336 aaPredicted RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 GLCEO94923 617 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 POP4O95707 220 aaKnown RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 IGSF6O95976 241 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 RAF1P04049 648 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 CSN3P07498 182 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 SERPINF2P08697 491 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 SBK2P0C263 348 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 ADRB3P13945 408 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 NUDT1P36639 197 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 CDKN2BP42772 138 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 RGRP47804 291 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 NPBWR1P48145 328 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms