RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 TROVE2P10155 538 aaKnown RBP eCLIP7.74□□□□□ -1.17
UBR1-204ENST00000563239 ETFAP13804 333 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 ATP6V1C1P21283 382 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 TCEA1P23193 301 aaKnown RBP7.74□□□□□ -1.17
UBR1-204ENST00000563239 ACVR2AP27037 513 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 STARP49675 285 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 CLK3P49761 638 aaKnown RBP7.74□□□□□ -1.17
UBR1-204ENST00000563239 LHX2P50458 406 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 ARFIP2P53365 341 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 GYS2P54840 703 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 CASP6P55212 293 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 CLDN15P56746 228 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 ZNF117Q03924 483 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 CHRNEQ04844 493 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 TOMM20Q15388 145 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 NDUFAF6Q330K2 333 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 C6orf10Q5SRN2 563 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 PDZK1Q5T2W1 519 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 CBLN3Q6UW01 205 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 DLEU7Q6UYE1 221 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 SEM1Q6ZVN7 128 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 RETREG3Q86VR2 466 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 ULK2Q8IYT8 1036 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 TRIML2Q8N7C3 387 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 OR5M1Q8NGP8 315 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 OR14L1PQ8NHC6 308 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 PHF10Q8WUB8 498 aaKnown RBP7.74□□□□□ -1.17
UBR1-204ENST00000563239 ABTB1Q969K4 478 aaPredicted RBP7.74□□□□□ -1.17
UBR1-204ENST00000563239 HOXD1Q9GZZ0 328 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 SLC38A1Q9H2H9 487 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 TP63Q9H3D4 680 aaPredicted RBP7.74□□□□□ -1.17
UBR1-204ENST00000563239 IKZF5Q9H5V7 419 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 RUBCNLQ9H714 662 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 EXO5Q9H790 373 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 SAR1AQ9NR31 198 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 EXD2Q9NVH0 621 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 VAPAQ9P0L0 249 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 KLHL14Q9P2G3 628 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 MKLN1Q9UL63 735 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 ICAM5Q9UMF0 924 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 TRIM33Q9UPN9 1127 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 RPH3AQ9Y2J0 694 aaPredicted RBP7.74□□□□□ -1.17
UBR1-204ENST00000563239 DTNAQ9Y4J8 743 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 GMEB1Q9Y692 573 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 DOPEY2Q9Y3R5 2298 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 CENPEQ02224 2701 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 MED12Q93074 2177 aa7.74□□□□□ -1.17
UBR1-204ENST00000563239 NCOA6Q14686 2063 aaPredicted RBP7.74□□□□□ -1.17
UBR1-204ENST00000563239 MYO7BQ6PIF6 2116 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 OR2M5A3KFT3 312 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 SERINC4A6NH21 518 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 SHISA8B8ZZ34 492 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 FBP2O00757 339 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 SCDO00767 359 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 GMFGO60234 142 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 DNAJA2O60884 412 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 WDR1O75083 606 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 TOXO94900 526 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 H6PDO95479 791 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 NUDT7P0C024 238 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 TFPTP0C1Z6 253 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 GLI4P10075 376 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 ESRRAP11474 423 aaPredicted RBP7.73□□□□□ -1.17
UBR1-204ENST00000563239 BMP2P12643 396 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 CPN1P15169 458 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 HK1P19367 917 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 CHMP24386 653 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 PSMA4P25789 261 aaKnown RBP7.73□□□□□ -1.17
UBR1-204ENST00000563239 MSX1P28360 303 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 ADH7P40394 386 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 MAGEA8P43361 318 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 SEC24CP53992 1094 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 PER3P56645 1201 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 CLDN18P56856 261 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 NUP107P57740 925 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 TXNL4AP83876 142 aaKnown RBP7.73□□□□□ -1.17
UBR1-204ENST00000563239 GANABQ14697 944 aaKnown RBP7.73□□□□□ -1.17
UBR1-204ENST00000563239 RGNQ15493 299 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 GPR68Q15743 365 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 GLYR1Q49A26 553 aaPredicted RBP7.73□□□□□ -1.17
UBR1-204ENST00000563239 C1orf185Q5T7R7 199 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 WLSQ5T9L3 541 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 ZNF585AQ6P3V2 769 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 C16orf62Q7Z3J2 963 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 MTERF4Q7Z6M4 381 aaKnown RBP7.73□□□□□ -1.17
UBR1-204ENST00000563239 HMGN2P46Q86SG4 172 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 MRGPRGQ86SM5 289 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 IFNEQ86WN2 208 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 MISPQ8IVT2 679 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 DPP10Q8N608 796 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 FAM71CQ8NEG0 241 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 B4GALNT2Q8NHY0 566 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 POC1BQ8TC44 478 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 PHOSPHO1Q8TCT1 267 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 ARSGQ96EG1 525 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 SH3YL1Q96HL8 342 aaPredicted RBP7.73□□□□□ -1.17
UBR1-204ENST00000563239 TRNT1Q96Q11 434 aaKnown RBP7.73□□□□□ -1.17
UBR1-204ENST00000563239 TTYH2Q9BSA4 534 aa7.73□□□□□ -1.17
UBR1-204ENST00000563239 RSPO3Q9BXY4 272 aaPredicted RBP7.73□□□□□ -1.17
UBR1-204ENST00000563239 QRSL1Q9H0R6 528 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms