RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 WDR77Q9BQA1 342 aaPredicted RBP8.78□□□□□ -1
CDH13-205ENST00000562307 PRSS27Q9BQR3 290 aa8.78□□□□□ -1
CDH13-205ENST00000562307 EDEM2Q9BV94 578 aa8.78□□□□□ -1
CDH13-205ENST00000562307 TRIM2Q9C040 744 aa8.78□□□□□ -1
CDH13-205ENST00000562307 FAM192AQ9GZU8 254 aa8.78□□□□□ -1
CDH13-205ENST00000562307 WWTR1Q9GZV5 400 aa8.78□□□□□ -1
CDH13-205ENST00000562307 AKIRIN1Q9H9L7 192 aaPredicted RBP8.78□□□□□ -1
CDH13-205ENST00000562307 TMEM9BQ9NQ34 198 aa8.78□□□□□ -1
CDH13-205ENST00000562307 CTPS2Q9NRF8 586 aa8.78□□□□□ -1
CDH13-205ENST00000562307 UBQLN4Q9NRR5 601 aa8.78□□□□□ -1
CDH13-205ENST00000562307 SLC39A1Q9NY26 324 aa8.78□□□□□ -1
CDH13-205ENST00000562307 NDUFA13Q9P0J0 144 aa8.78□□□□□ -1
CDH13-205ENST00000562307 SLC35A3Q9Y2D2 325 aa8.78□□□□□ -1
CDH13-205ENST00000562307 NTNG1Q9Y2I2 539 aa8.78□□□□□ -1
CDH13-205ENST00000562307 PCDHGA1Q9Y5H4 931 aa8.78□□□□□ -1
CDH13-205ENST00000562307 COL27A1Q8IZC6 1860 aaPredicted RBP8.78□□□□□ -1
CDH13-205ENST00000562307 WDR87Q6ZQQ6 2873 aa8.78□□□□□ -1
CDH13-205ENST00000562307 A0A0C4DFX4 3053 aa8.77□□□□□ -1
CDH13-205ENST00000562307 CCDC88CQ9P219 2028 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 LOC102723996A0A087X1L8 192 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 SLC1A7O00341 560 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 KLF4O43474 513 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 GDF9O60383 454 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 MRPS14O60783 128 aaKnown RBP8.77□□□□□ -1.01
CDH13-205ENST00000562307 LRP3O75074 770 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 WBP4O75554 376 aaKnown RBP8.77□□□□□ -1.01
CDH13-205ENST00000562307 RFPL3O75679 317 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 KLK3P07288 261 aaPredicted RBP8.77□□□□□ -1.01
CDH13-205ENST00000562307 GKN3PP0CG01 181 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 ATXN8OSP0DMR3 200 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 ATP6V1B1P15313 513 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 GABRB1P18505 474 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 SLC5A2P31639 672 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 OMPP47874 163 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 RFX3P48380 749 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 PNLIPRP2P54317 469 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 CDH15P55291 814 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 RAB15P59190 212 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 LSM11P83369 360 aaKnown RBP eCLIP8.77□□□□□ -1.01
CDH13-205ENST00000562307 INSM1Q01101 510 aaPredicted RBP8.77□□□□□ -1.01
CDH13-205ENST00000562307 TSPAN31Q12999 210 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 NNATQ16517 81 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 CSRP2Q16527 193 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 ISXQ2M1V0 245 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 SLX4IPQ5VYV7 408 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 HLA-DQA1Q5Y7H0 255 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 C12orf73Q69YU5 71 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 ZNF773Q6PK81 442 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 FAM198BQ6UWH4 519 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 LINC00114Q6XXX2 140 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 ZNF730Q6ZMV8 503 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 Q6ZPB1 254 aaPredicted RBP8.77□□□□□ -1.01
CDH13-205ENST00000562307 SHISA6Q6ZSJ9 500 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 RASSF6Q6ZTQ3 369 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 CPEB2Q7Z5Q1 589 aaKnown RBP8.77□□□□□ -1.01
CDH13-205ENST00000562307 ZNF440Q8IYI8 595 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 SLC34A3Q8N130 599 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 ZNF527Q8NB42 609 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 OR8K3Q8NH51 312 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 WDR36Q8NI36 951 aaKnown RBP8.77□□□□□ -1.01
CDH13-205ENST00000562307 PIGXQ8TBF5 258 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 LIN37Q96GY3 246 aaPredicted RBP8.77□□□□□ -1.01
CDH13-205ENST00000562307 HS6ST2Q96MM7 605 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 LMF1Q96S06 567 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 ZPBPQ9BS86 351 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 SPRY4Q9C004 299 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 STRADBQ9C0K7 418 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 DUSP21Q9H596 190 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 TMEM27Q9HBJ8 222 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 EXOSC3Q9NQT5 275 aaKnown RBP8.77□□□□□ -1.01
CDH13-205ENST00000562307 PLCXD1Q9NUJ7 323 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 ZNF226Q9NYT6 803 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 FLRT3Q9NZU0 649 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 ZNF223Q9UK11 482 aaPredicted RBP8.77□□□□□ -1.01
CDH13-205ENST00000562307 BLOC1S6Q9UL45 172 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 SLC7A7Q9UM01 511 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 RNF6Q9Y252 685 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 TTC28Q96AY4 2481 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 VPS13AQ96RL7 3174 aa8.77□□□□□ -1.01
CDH13-205ENST00000562307 FER1L5A0AVI2 2057 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 A0A0B4J2E0 115 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 IGHV3-20A0A0C4DH32 117 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 SMIM31A0A1B0GVY4 71 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 A0A1B0GX12 115 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 A0A1W2PQD3 144 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 TNFRSF10AO00220 468 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 AGRPO00253 132 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 CHP2O43745 196 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 PRKNO60260 465 aaPredicted RBP8.76□□□□□ -1.01
CDH13-205ENST00000562307 MPZL2O60487 215 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 ABCB7O75027 752 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 ADAM11O75078 769 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 KLF7O75840 302 aaPredicted RBP8.76□□□□□ -1.01
CDH13-205ENST00000562307 UTS2O95399 124 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 ANGPTL1O95841 491 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 CSTAP01040 98 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 CD63P08962 238 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 LINGO3P0C6S8 592 aa8.76□□□□□ -1.01
CDH13-205ENST00000562307 JUNBP17275 347 aaPredicted RBP8.76□□□□□ -1.01
CDH13-205ENST00000562307 FPR3P25089 353 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms