RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 GLYR1Q49A26 553 aaPredicted RBP15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 OR4F3Q6IEY1 312 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 VWA1Q6PCB0 445 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 GGNQ86UU5 652 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 CLECL1Q8IZS7 167 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 FNDC9Q8TBE3 224 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 ACTRT3Q9BYD9 372 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 PIGMQ9H3S5 423 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 AKTIPQ9H8T0 292 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 UBQLN4Q9NRR5 601 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 FAF1Q9UNN5 650 aaPredicted RBP15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 KCNE3Q9Y6H6 103 aa15.49■□□□□ 0.07
CDC42BPB-208ENST00000561271 ROS1P08922 2347 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 LINC01387J3KSC0 135 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 SMNDC1O75940 238 aaKnown RBP eCLIP15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 ZNF17P17021 662 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 ZNF41P51814 821 aaPredicted RBP15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 CLDN8P56748 225 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 EEFSECP57772 596 aaKnown RBP15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 PLPPR5Q32ZL2 321 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 DCST2Q5T1A1 773 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 OR2A2Q6IF42 318 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 PPP4R4Q6NUP7 873 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 CAMKMTQ7Z624 323 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 CLEC4FQ8N1N0 589 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 NATD1Q8N6N6 113 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 ANKRD42Q8N9B4 389 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 OR5D16Q8NGK9 328 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 ADAMTS15Q8TE58 950 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 PAIP2Q9BPZ3 127 aaKnown RBP15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 NUF2Q9BZD4 464 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 LIME1Q9H400 295 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 SERHL2Q9H4I8 314 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 MED17Q9NVC6 651 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 AP4B1Q9Y6B7 739 aa15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 FLNAP21333 2647 aaKnown RBP15.48■□□□□ 0.07
CDC42BPB-208ENST00000561271 ARID1AO14497 2285 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 ACANP16112 2415 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 A0A1W2PQD3 144 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 FAM221AA4D161 298 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 EIF1AYO14602 144 aaKnown RBP15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 OIP5O43482 229 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 TNFRSF21O75509 655 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 KRT16P08779 473 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 EPXP11678 715 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 ATP6V1C1P21283 382 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 LCN1P31025 176 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 RPL14P50914 215 aaKnown RBP15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 ART1P52961 327 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 RPS3AP61247 264 aaKnown RBP15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 ZNF117Q03924 483 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 BST1Q10588 318 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 CDC20BQ86Y33 519 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 GTPBP8Q8N3Z3 284 aaPredicted RBP15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 METTL25Q8N6Q8 603 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 PHOSPHO1Q8TCT1 267 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 MOAP1Q96BY2 351 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 STARD4Q96DR4 205 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 PGM2Q96G03 612 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 RNF145Q96MT1 663 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 OR7D2Q96RA2 312 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 TMEM185BQ9H7F4 350 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 ZNF175Q9Y473 711 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 ACTL7BQ9Y614 415 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 MTORP42345 2549 aa15.47■□□□□ 0.07
CDC42BPB-208ENST00000561271 A0A087WZY1 265 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 RNF103-CHMP3A0A140T963 221 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 A8MXE2 369 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 MSTNO14793 375 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 AQP8O94778 261 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 OPN1LWP04000 364 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 CRHP06850 196 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 EIF1AXP47813 144 aaKnown RBP15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 STX3Q13277 289 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 DAZAP2Q15038 168 aaPredicted RBP15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 SGCBQ16585 318 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 SMU1Q2TAY7 513 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 NDUFAF6Q330K2 333 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 FBXW10Q5XX13 1052 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 BTLAQ7Z6A9 289 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 ANKRD46Q86W74 232 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 MISPQ8IVT2 679 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 ZNF614Q8N883 585 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 B4GALNT2Q8NHY0 566 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 ZBTB8AQ96BR9 441 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 SLC35G5Q96KT7 338 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 DPY30Q9C005 99 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 OPN3Q9H1Y3 402 aaPredicted RBP15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 RNF122Q9H9V4 155 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 HHATLQ9HCP6 504 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 PNPOQ9NVS9 261 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 HAO1Q9UJM8 370 aa15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.46■□□□□ 0.07
CDC42BPB-208ENST00000561271 C7orf72A4D263 438 aa15.45■□□□□ 0.06
CDC42BPB-208ENST00000561271 SH3D21A4FU49 640 aa15.45■□□□□ 0.06
CDC42BPB-208ENST00000561271 PSMA4P25789 261 aaKnown RBP15.45■□□□□ 0.06
CDC42BPB-208ENST00000561271 KIR2DL2P43627 348 aaPredicted RBP15.45■□□□□ 0.06
CDC42BPB-208ENST00000561271 SLC6A8P48029 635 aa15.45■□□□□ 0.06
CDC42BPB-208ENST00000561271 IST1P53990 364 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms