RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MISPQ8IVT2 679 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 TUSC5Q8IXB3 177 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 BANPQ8N9N5 519 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 HOXB13Q92826 284 aaPredicted RBP16.45■□□□□ 0.22
TPM1-226ENST00000560959 ELP4Q96EB1 424 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 APIPQ96GX9 242 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 KLHL15Q96M94 604 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 RNF145Q96MT1 663 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 ACPTQ9BZG2 426 aa16.45■□□□□ 0.22
TPM1-226ENST00000560959 WBP11Q9Y2W2 641 aaKnown RBP16.45■□□□□ 0.22
TPM1-226ENST00000560959 UTP11Q9Y3A2 253 aaKnown RBP16.45■□□□□ 0.22
TPM1-226ENST00000560959 SERTM1A2A2V5 107 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 RAD51CO43502 376 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 GMFGO60234 142 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 RAMP1O60894 148 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 PRKD3O94806 890 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 OPN1LWP04000 364 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 YES1P07947 543 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 CHN1P15882 459 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 LCN1P31025 176 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 GABRA3P34903 492 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 MAP3K8P41279 467 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 EIF1P41567 113 aaKnown RBP16.44■□□□□ 0.22
TPM1-226ENST00000560959 ZNF41P51814 821 aaPredicted RBP16.44■□□□□ 0.22
TPM1-226ENST00000560959 MANFP55145 182 aaKnown RBP16.44■□□□□ 0.22
TPM1-226ENST00000560959 CLCQ05315 142 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 SLC29A2Q14542 456 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 Q6ZT83 130 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 BHLHA15Q7RTS1 189 aaPredicted RBP16.44■□□□□ 0.22
TPM1-226ENST00000560959 P2RY8Q86VZ1 359 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 LILRA2Q8N149 483 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 SLC43A2Q8N370 569 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 CDYL2Q8N8U2 506 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.44■□□□□ 0.22
TPM1-226ENST00000560959 ABHD3Q8WU67 409 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 PROX1Q92786 737 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 MRRFQ96E11 262 aaKnown RBP16.44■□□□□ 0.22
TPM1-226ENST00000560959 NPAS1Q99742 590 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 NAPGQ99747 312 aaPredicted RBP16.44■□□□□ 0.22
TPM1-226ENST00000560959 MRPL46Q9H2W6 279 aaKnown RBP16.44■□□□□ 0.22
TPM1-226ENST00000560959 GLIPR2Q9H4G4 154 aa16.44■□□□□ 0.22
TPM1-226ENST00000560959 ZNF814B7Z6K7 855 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 LMX1BO60663 402 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 IGKV1D-16P01601 117 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 ANXA4P09525 319 aaPredicted RBP16.43■□□□□ 0.22
TPM1-226ENST00000560959 TSPAN8P19075 237 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 ELK4P28324 431 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 RFX3P48380 749 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 CDH11P55287 796 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 C21orf58P58505 322 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 IRX1P78414 480 aaPredicted RBP16.43■□□□□ 0.22
TPM1-226ENST00000560959 SLC18A2Q05940 514 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 PPA1Q15181 289 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 UAP1Q16222 522 aaPredicted RBP16.43■□□□□ 0.22
TPM1-226ENST00000560959 VPS26BQ4G0F5 336 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 GLE1Q53GS7 698 aaKnown RBP16.43■□□□□ 0.22
TPM1-226ENST00000560959 TCHHL1Q5QJ38 904 aaPredicted RBP16.43■□□□□ 0.22
TPM1-226ENST00000560959 TIMM23BQ5SRD1 257 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 C11orf71Q6IPW1 123 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 ZNF619Q8N2I2 560 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 TMEM151AQ8N4L1 468 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 OR4C3Q8NH37 302 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 POC1BQ8TC44 478 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 METTL6Q8TCB7 284 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 SLC9A6Q92581 669 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 MUCL1Q96DR8 90 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 AMDHD1Q96NU7 426 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 ZNF382Q96SR6 550 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 CBLN4Q9NTU7 201 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 CADP27708 2225 aa16.43■□□□□ 0.22
TPM1-226ENST00000560959 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.42■□□□□ 0.225e-6■■■□□ 16.3
TPM1-226ENST00000560959 GJE1A6NN92 205 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 A8MT66 165 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 NKX2-2O95096 273 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 OXSR1O95747 527 aaPredicted RBP16.42■□□□□ 0.22
TPM1-226ENST00000560959 SRD5A1P18405 259 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 NTSP30990 170 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 TTKP33981 857 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 GNG11P61952 73 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 ZNF763Q0D2J5 394 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 C2orf80Q0P641 193 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 RAB35Q15286 201 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 PRSS53Q2L4Q9 553 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 FAM71E1Q6IPT2 247 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 ZDHHC24Q6UX98 284 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 Q6ZSR9 355 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 FCRLAQ7L513 359 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 MMGT1Q8N4V1 131 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 SPATA4Q8NEY3 305 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 FAM110BQ8TC76 370 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 CACNG6Q9BXT2 260 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 BCO1Q9HAY6 547 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 MGAT4BQ9UQ53 548 aa16.42■□□□□ 0.22
TPM1-226ENST00000560959 ALPK2Q86TB3 2170 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 GXYLT2A0PJZ3 443 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 PGM3O95394 542 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 NTN1O95631 604 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 CSF3P09919 207 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 SBK3P0C264 359 aa16.41■□□□□ 0.22
TPM1-226ENST00000560959 LINGO3P0C6S8 592 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms