RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 IFNEQ86WN2 208 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 ZDHHC21Q8IVQ6 265 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 SLC39A11Q8N1S5 342 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 Q8N9G6 341 aaPredicted RBP4.21□□□□□ -1.74
MARK3-220ENST00000560417 GTSF1Q8WW33 167 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 GSDMCQ9BYG8 508 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 FARSBQ9NSD9 589 aaKnown RBP4.21□□□□□ -1.74
MARK3-220ENST00000560417 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.21□□□□□ -1.74
MARK3-220ENST00000560417 MRPL39Q9NYK5 338 aaKnown RBP4.21□□□□□ -1.74
MARK3-220ENST00000560417 SLC2A6Q9UGQ3 507 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 SMC3Q9UQE7 1217 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 NCOA2Q15596 1464 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 CFAP74Q9C0B2 1584 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 MADDQ8WXG6 1647 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 ZMYM4Q5VZL5 1548 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 SCAPERQ9BY12 1400 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 ATP10DQ9P241 1426 aa4.21□□□□□ -1.74
MARK3-220ENST00000560417 KDM5CP41229 1560 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 DIP2CQ9Y2E4 1556 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 DENND4BO75064 1496 aaPredicted RBP4.2□□□□□ -1.74
MARK3-220ENST00000560417 LATO43561 262 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 NEBLO76041 1014 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 PDHBP11177 359 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 IGHV1-2P23083 117 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 PSMA2P25787 234 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 NOVA1P51513 510 aaKnown RBP4.2□□□□□ -1.74
MARK3-220ENST00000560417 RND3P61587 244 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 RPL8P62917 257 aaKnown RBP4.2□□□□□ -1.74
MARK3-220ENST00000560417 CXCL6P80162 114 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 CNTN2Q02246 1040 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 ZNF154Q13106 437 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 SNTB2Q13425 540 aaKnown RBP4.2□□□□□ -1.74
MARK3-220ENST00000560417 TIMM50Q3ZCQ8 353 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 USH1GQ495M9 461 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 SLC36A3Q495N2 470 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 NADK2Q4G0N4 442 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 PVRIGQ6DKI7 326 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 UFSP1Q6NVU6 142 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 DPY19L4Q7Z388 723 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 C9orf40Q8IXQ3 194 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 ZSCAN4Q8NAM6 433 aaPredicted RBP4.2□□□□□ -1.74
MARK3-220ENST00000560417 OR9A4Q8NGU2 314 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 M1APQ8TC57 530 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 CCT8L2Q96SF2 557 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 RAB33BQ9H082 229 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 MEAF6Q9HAF1 191 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 PALMDQ9NP74 551 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 CRLS1Q9UJA2 301 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 GSTK1Q9Y2Q3 226 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 L3MBTL1Q9Y468 752 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 SPACA6W5XKT8 324 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 ZFYVE16Q7Z3T8 1539 aa4.2□□□□□ -1.74
MARK3-220ENST00000560417 KIDINS220Q9ULH0 1771 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 HECW2Q9P2P5 1572 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 LRRC9Q6ZRR7 1453 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 MTUS2Q5JR59 1369 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 BCORL1Q5H9F3 1711 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 SUPT6HQ7KZ85 1726 aaKnown RBP4.19□□□□□ -1.74
MARK3-220ENST00000560417 FRG2CA6NGY1 282 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 PPIAL4DF5H284 164 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 TBX19O60806 448 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 PGAM2P15259 253 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 TPSB2P20231 275 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 NT5EP21589 574 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 PAX7P23759 505 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 FASP25445 335 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 CA8P35219 290 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 MAGEA9P43362 315 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 XCR1P46094 333 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 FNTAP49354 379 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 NTHL1P78549 312 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 TPSAB1Q15661 275 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 SLC1A5Q15758 541 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 RABGAP1LQ5R372 815 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 ATAD3CQ5T2N8 411 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 ZNF774Q6NX45 483 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 PAMR1Q6UXH9 720 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 BAIAP2L2Q6UXY1 529 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 LRRC70Q7Z2Q7 622 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 KLHL30-AS1Q8NEE0 82 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 IPMKQ8NFU5 416 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 RAET1EQ8TD07 263 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 ARNTL2Q8WYA1 636 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 THRSPQ92748 146 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 ANKRD9Q96BM1 317 aaPredicted RBP4.19□□□□□ -1.74
MARK3-220ENST00000560417 TMEM80Q96HE8 168 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 DPH7Q9BTV6 452 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 ELOVL4Q9GZR5 314 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 RPS10P5Q9NQ39 176 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 NAALAD2Q9Y3Q0 740 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 USP16Q9Y5T5 823 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 ADAMTSL3P82987 1691 aa4.19□□□□□ -1.74
MARK3-220ENST00000560417 RIMS1Q86UR5 1692 aaKnown RBP4.19□□□□□ -1.74
MARK3-220ENST00000560417 INO80Q9ULG1 1556 aaPredicted RBP4.19□□□□□ -1.74
MARK3-220ENST00000560417 CAMSAP2Q08AD1 1489 aa4.18□□□□□ -1.74
MARK3-220ENST00000560417 IGKV3D-20A0A0C4DH25 116 aa4.18□□□□□ -1.74
MARK3-220ENST00000560417 GSAPA4D1B5 854 aa4.18□□□□□ -1.74
MARK3-220ENST00000560417 SAGE2PA6NJ88 616 aa4.18□□□□□ -1.74
MARK3-220ENST00000560417 CDX4O14627 284 aaPredicted RBP4.18□□□□□ -1.74
MARK3-220ENST00000560417 XPO1O14980 1071 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms