RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 GRAMD1BQ3KR37 738 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 COLEC12Q5KU26 742 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 DCAF10Q5QP82 559 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PDZK1Q5T2W1 519 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PLAG1Q6DJT9 500 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 GLYATQ6IB77 296 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 TYW3Q6IPR3 259 aaKnown RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 HEPHL1Q6MZM0 1159 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ZNF836Q6ZNA1 936 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 SLC29A4Q7RTT9 530 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 SPATA24Q86W54 205 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 RAB43Q86YS6 212 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 RBM45Q8IUH3 476 aaKnown RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 LACC1Q8IV20 430 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 CDRT4Q8N9R6 151 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 C11orf65Q8NCR3 313 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 GPR32P1Q8NGA4 272 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 OR10G3Q8NGC4 313 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 OR4D11Q8NGI4 311 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 M1APQ8TC57 530 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 MIPOL1Q8TD10 442 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PYDC1Q8WXC3 89 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 HOXB13Q92826 284 aaPredicted RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 FGF11Q92914 225 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 RELTQ969Z4 430 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 FAM162AQ96A26 154 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 MOAP1Q96BY2 351 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ZNF524Q96C55 264 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ASB9Q96DX5 294 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 THOC3Q96J01 351 aaKnown RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 LCORQ96JN0 433 aaPredicted RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 COL21A1Q96P44 957 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 NODALQ96S42 347 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 RASL10BQ96S79 203 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ADOQ96SZ5 270 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 SDF2Q99470 211 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 TREX2Q9BQ50 279 aaPredicted RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 HES7Q9BYE0 225 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 DEFB126Q9BYW3 111 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 B3GNT4Q9C0J1 378 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ZNF350Q9GZX5 532 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 SLC38A1Q9H2H9 487 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PIGUQ9H490 435 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 CDCP1Q9H5V8 836 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ZBTB20Q9HC78 741 aaPredicted RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 GALNT9Q9HCQ5 603 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 Q9N2J8 555 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 RLIMQ9NVW2 624 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PLA2G3Q9NZ20 509 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PRODH2Q9UF12 536 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 KCND3Q9UK17 655 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ANGPTL2Q9UKU9 493 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 CBLCQ9ULV8 474 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 PPIEQ9UNP9 301 aaKnown RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 CORO2BQ9UQ03 480 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 ANGPT4Q9Y264 503 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 NTNG1Q9Y2I2 539 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 RRP15Q9Y3B9 282 aaKnown RBP4.79□□□□□ -1.64
SPG11-220ENST00000559933 OR10H1Q9Y4A9 318 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 CHST2Q9Y4C5 530 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 CSAG2Q9Y5P2 127 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 SNX13Q9Y5W8 968 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 MED13Q9UHV7 2174 aa4.79□□□□□ -1.64
SPG11-220ENST00000559933 MGAQ8IWI9 3026 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 TNRC6AQ8NDV7 1962 aaKnown RBP4.78□□□□□ -1.64
SPG11-220ENST00000559933 ZZEF1O43149 2961 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 DSPPQ9NZW4 1301 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 CPAMD8Q8IZJ3 1885 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 A0A1W2PQ72 361 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 OR14I1A6ND48 311 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 CFAP73A6NFT4 308 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 ZNF891A8MT65 544 aaPredicted RBP4.78□□□□□ -1.64
SPG11-220ENST00000559933 H0Y3Z8 333 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 J3KTA2 159 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 hCG_2039718K7EN88 272 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 M0QX08 132 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 ADAM10O14672 748 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 ASNA1O43681 348 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 SCO2O43819 266 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 PSPNO60542 156 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 SEMA7AO75326 666 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 ITGA10O75578 1167 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 REM1O75628 298 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 BCAS2O75934 225 aaPredicted RBP4.78□□□□□ -1.64
SPG11-220ENST00000559933 ZFAND5O76080 213 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 PRKD3O94806 890 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 OXSR1O95747 527 aaPredicted RBP4.78□□□□□ -1.64
SPG11-220ENST00000559933 IGHEP01854 428 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 CAPNS1P04632 268 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 SERPINA7P05543 415 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 CYC1P08574 325 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 MED14OSP0DP75 135 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 PRG2P13727 222 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 CD247P20963 164 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 TCEA1P23193 301 aaKnown RBP4.78□□□□□ -1.64
SPG11-220ENST00000559933 KDELR2P33947 212 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 DCTP40126 519 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 YAP1P46937 504 aaKnown RBP4.78□□□□□ -1.64
SPG11-220ENST00000559933 OR1E2P47887 323 aa4.78□□□□□ -1.64
SPG11-220ENST00000559933 CCL11P51671 97 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms