RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 TUBA3CQ13748 450 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 RCN1Q15293 331 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 CD226Q15762 336 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 NRF1Q16656 503 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 PRAMEF20Q5VT98 475 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 AP1ARQ63HQ0 302 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 ZFP1Q6P2D0 407 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 TUBA3EQ6PEY2 450 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 APOOLQ6UXV4 268 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 DEF8Q6ZN54 512 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 RTL4Q6ZR62 310 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 ERMP1Q7Z2K6 904 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 RBM45Q8IUH3 476 aaKnown RBP9.56□□□□□ -0.88
TPM1-221ENST00000559831 LACC1Q8IV20 430 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 ZDHHC21Q8IVQ6 265 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 APLFQ8IW19 511 aaPredicted RBP9.56□□□□□ -0.88
TPM1-221ENST00000559831 FDCSPQ8NFU4 85 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 CNOT9Q92600 299 aaKnown RBP9.56□□□□□ -0.88
TPM1-221ENST00000559831 ARSGQ96EG1 525 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 SH3YL1Q96HL8 342 aaPredicted RBP9.56□□□□□ -0.88
TPM1-221ENST00000559831 ARHGDIGQ99819 225 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 WFDC6Q9BQY6 131 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 CHID1Q9BWS9 393 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 ZNF552Q9H707 407 aaPredicted RBP9.56□□□□□ -0.88
TPM1-221ENST00000559831 YY1AP1Q9H869 796 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 GALNT9Q9HCQ5 603 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 SLC35A3Q9Y2D2 325 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 CHST2Q9Y4C5 530 aa9.56□□□□□ -0.88
TPM1-221ENST00000559831 CNTRLQ7Z7A1 2325 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 A0A1W2PQD3 144 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 CDHR4A6H8M9 788 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 C17orf51A8MQB3 221 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 ALG1L2C9J202 215 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 G3V3Y1 287 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 H3BNX3 289 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 K7ENP7 123 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 TAF4O00268 1085 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 OIP5O43482 229 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 DIRAS1O95057 198 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 ANGPTL1O95841 491 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 SEMG1P04279 462 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 P04436 131 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 UBL4AP11441 157 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 CD96P40200 585 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 YAP1P46937 504 aaKnown RBP9.55□□□□□ -0.88
TPM1-221ENST00000559831 CCR4P51679 360 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 UCNP55089 124 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 CXADRP78310 365 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 ARG2P78540 354 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 VLDLRP98155 873 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 HOXC5Q00444 222 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 KCNC4Q03721 635 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 FOXD4Q12950 439 aaPredicted RBP9.55□□□□□ -0.88
TPM1-221ENST00000559831 MFAP5Q13361 173 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 FNDC7Q5VTL7 733 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 SLC22A10Q63ZE4 541 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 AAGABQ6PD74 315 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 INO80CQ6PI98 192 aaPredicted RBP9.55□□□□□ -0.88
TPM1-221ENST00000559831 GPALPP1Q8IXQ4 340 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 CMIPQ8IY22 773 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 OR4D11Q8NGI4 311 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 OR6T1Q8NGN1 323 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 APOBEC4Q8WW27 367 aaKnown RBP9.55□□□□□ -0.88
TPM1-221ENST00000559831 OIT3Q8WWZ8 545 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 DUS3LQ96G46 650 aaKnown RBP9.55□□□□□ -0.88
TPM1-221ENST00000559831 SGCZQ96LD1 299 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 OSBPL11Q9BXB4 747 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 RTN4RQ9BZR6 473 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 AMBRA1Q9C0C7 1298 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 TIMMDC1Q9NPL8 285 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 RYDENQ9NUL5 291 aaKnown RBP9.55□□□□□ -0.88
TPM1-221ENST00000559831 DNAJB12Q9NXW2 375 aaKnown RBP9.55□□□□□ -0.88
TPM1-221ENST00000559831 PPP4R1LQ9P1A2 415 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 LRFN1Q9P244 771 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 CNOT11Q9UKZ1 510 aaKnown RBP9.55□□□□□ -0.88
TPM1-221ENST00000559831 CARD8Q9Y2G2 431 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 CHCHD2Q9Y6H1 151 aaPredicted RBP9.55□□□□□ -0.88
TPM1-221ENST00000559831 CACNA1AO00555 2505 aa9.55□□□□□ -0.88
TPM1-221ENST00000559831 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 NCOR2Q9Y618 2525 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 J3KTA2 159 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 AP3D1O14617 1153 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 ZNF264O43296 627 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 HNRNPRO43390 633 aaKnown RBP9.54□□□□□ -0.88
TPM1-221ENST00000559831 HCRTR2O43614 444 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 PRG2P13727 222 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 ENDOUP21128 410 aaKnown RBP9.54□□□□□ -0.88
TPM1-221ENST00000559831 RYKP34925 604 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 PTGDSP41222 190 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 CASP3P42574 277 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 PLAURQ03405 335 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 ZNF117Q03924 483 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 OR1C1Q15619 314 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 NPTX1Q15818 432 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 ZSWIM7Q19AV6 140 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 SPINK14Q6IE38 97 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 OR5M10Q6IEU7 315 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 BORAQ6PGQ7 559 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 MDGA2Q7Z553 956 aa9.54□□□□□ -0.88
TPM1-221ENST00000559831 RANBP3LQ86VV4 465 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms